RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 DNAH8Q96JB1 4490 aa12.26□□□□□ -0.45
CASC4-209ENST00000559222 LOC389332A0A1B0GUA5 103 aa12.25□□□□□ -0.45
CASC4-209ENST00000559222 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
CASC4-209ENST00000559222 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
CASC4-209ENST00000559222 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
CASC4-209ENST00000559222 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
CASC4-209ENST00000559222 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
CASC4-209ENST00000559222 TRAV9-1A0A075B6T8 112 aa12.24□□□□□ -0.45
CASC4-209ENST00000559222 ZNF25P17030 456 aaPredicted RBP12.24□□□□□ -0.45
CASC4-209ENST00000559222 SLC7A5P1Q8MH63 180 aa12.24□□□□□ -0.45
CASC4-209ENST00000559222 OR5A1Q8NGJ0 315 aa12.24□□□□□ -0.45
CASC4-209ENST00000559222 GCSHP23434 173 aa12.23□□□□□ -0.45
CASC4-209ENST00000559222 S100PP25815 95 aa12.23□□□□□ -0.45
CASC4-209ENST00000559222 Q6ZUT4 128 aa12.23□□□□□ -0.45
CASC4-209ENST00000559222 CDC42SE2Q9NRR3 84 aa12.23□□□□□ -0.45
CASC4-209ENST00000559222 TGIF2-C20orf24A0A0A6YYL0 155 aa12.22□□□□□ -0.45
CASC4-209ENST00000559222 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
CASC4-209ENST00000559222 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
CASC4-209ENST00000559222 HAMPP81172 84 aa12.22□□□□□ -0.45
CASC4-209ENST00000559222 FAM104AQ969W3 186 aa12.22□□□□□ -0.45
CASC4-209ENST00000559222 TMEM101Q96IK0 257 aa12.22□□□□□ -0.45
CASC4-209ENST00000559222 CDK2AP2O75956 126 aa12.21□□□□□ -0.45
CASC4-209ENST00000559222 PRSS1P07477 247 aa12.21□□□□□ -0.45
CASC4-209ENST00000559222 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.45
CASC4-209ENST00000559222 CHCHD10Q8WYQ3 142 aaPredicted RBP12.21□□□□□ -0.45
CASC4-209ENST00000559222 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.45
CASC4-209ENST00000559222 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
CASC4-209ENST00000559222 OPRPNQ99935 248 aaPredicted RBP12.2□□□□□ -0.46
CASC4-209ENST00000559222 LAMTOR2Q9Y2Q5 125 aa12.2□□□□□ -0.46
CASC4-209ENST00000559222 ABCA13Q86UQ4 5058 aa12.2□□□□□ -0.46
CASC4-209ENST00000559222 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
CASC4-209ENST00000559222 SVBPQ8N300 66 aa12.19□□□□□ -0.46
CASC4-209ENST00000559222 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
CASC4-209ENST00000559222 SNAPINO95295 136 aa12.18□□□□□ -0.46
CASC4-209ENST00000559222 XGP55808 180 aa12.18□□□□□ -0.46
CASC4-209ENST00000559222 FOXI1Q12951 378 aa12.18□□□□□ -0.46
CASC4-209ENST00000559222 NDUFA5Q16718 116 aa12.18□□□□□ -0.46
CASC4-209ENST00000559222 Q8N8P6 123 aa12.18□□□□□ -0.46
CASC4-209ENST00000559222 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
CASC4-209ENST00000559222 CCL25O15444 150 aa12.17□□□□□ -0.46
CASC4-209ENST00000559222 XCL1P47992 114 aa12.17□□□□□ -0.46
CASC4-209ENST00000559222 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
CASC4-209ENST00000559222 C15orf56Q8N910 161 aa12.17□□□□□ -0.46
CASC4-209ENST00000559222 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
CASC4-209ENST00000559222 CSDC2Q9Y534 153 aaKnown RBP12.17□□□□□ -0.46
CASC4-209ENST00000559222 IFI27P40305 119 aaPredicted RBP12.16□□□□□ -0.46
CASC4-209ENST00000559222 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
CASC4-209ENST00000559222 RAB5AP20339 215 aa12.15□□□□□ -0.46
CASC4-209ENST00000559222 YPEL4Q96NS1 127 aa12.15□□□□□ -0.46
CASC4-209ENST00000559222 ALKBH7Q9BT30 221 aaPredicted RBP12.15□□□□□ -0.46
CASC4-209ENST00000559222 KRTAP4-5Q9BYR2 181 aa12.15□□□□□ -0.46
CASC4-209ENST00000559222 C14orf177Q52M58 125 aa12.14□□□□□ -0.47
CASC4-209ENST00000559222 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
CASC4-209ENST00000559222 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
CASC4-209ENST00000559222 SLPIP03973 132 aa12.13□□□□□ -0.47
CASC4-209ENST00000559222 HIGD2BQ4VC39 106 aa12.13□□□□□ -0.47
CASC4-209ENST00000559222 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
CASC4-209ENST00000559222 hDV102S1A0JD36 115 aa12.12□□□□□ -0.47
CASC4-209ENST00000559222 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
CASC4-209ENST00000559222 CBLN2Q8IUK8 224 aa12.12□□□□□ -0.47
CASC4-209ENST00000559222 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
CASC4-209ENST00000559222 MT-ND6P03923 174 aa12.11□□□□□ -0.47
CASC4-209ENST00000559222 SS18Q15532 418 aa12.11□□□□□ -0.47
CASC4-209ENST00000559222 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
CASC4-209ENST00000559222 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
CASC4-209ENST00000559222 COX19Q49B96 90 aa12.1□□□□□ -0.47
CASC4-209ENST00000559222 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
CASC4-209ENST00000559222 Q6ZSA8 131 aa12.1□□□□□ -0.47
CASC4-209ENST00000559222 NXT2Q9NPJ8 142 aaKnown RBP12.1□□□□□ -0.47
CASC4-209ENST00000559222 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
CASC4-209ENST00000559222 LINC00526Q96FQ7 95 aa12.09□□□□□ -0.47
CASC4-209ENST00000559222 CD164L2Q6UWJ8 174 aa12.08□□□□□ -0.48
CASC4-209ENST00000559222 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
CASC4-209ENST00000559222 TRAPPC1Q9Y5R8 145 aa12.08□□□□□ -0.48
CASC4-209ENST00000559222 ORMDL2Q53FV1 153 aa12.07□□□□□ -0.48
CASC4-209ENST00000559222 LINC00173Q6ZV60 143 aa12.07□□□□□ -0.48
CASC4-209ENST00000559222 PYGO1Q9Y3Y4 419 aa12.07□□□□□ -0.48
CASC4-209ENST00000559222 FAT1Q14517 4588 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 GVQW2A0A096LPI5 108 aaPredicted RBP12.06□□□□□ -0.48
CASC4-209ENST00000559222 IFITM10A6NMD0 228 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 C1orf196B1AJZ1 125 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 CNBPP62633 177 aaKnown RBP12.06□□□□□ -0.48
CASC4-209ENST00000559222 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 URB1-AS1Q96HZ7 61 aa12.06□□□□□ -0.48
CASC4-209ENST00000559222 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
CASC4-209ENST00000559222 IGIPA6NJ69 53 aa12.05□□□□□ -0.48
CASC4-209ENST00000559222 PANO1I0J062 215 aa12.05□□□□□ -0.48
CASC4-209ENST00000559222 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
CASC4-209ENST00000559222 K7EMI3 77 aa12.04□□□□□ -0.48
CASC4-209ENST00000559222 Q8N1X5 172 aa12.04□□□□□ -0.48
CASC4-209ENST00000559222 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
CASC4-209ENST00000559222 TMEM141Q96I45 108 aa12.04□□□□□ -0.48
CASC4-209ENST00000559222 IGHV1-58A0A0C4DH39 117 aa12.03□□□□□ -0.48
CASC4-209ENST00000559222 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
CASC4-209ENST00000559222 SCXQ7RTU7 201 aa12.03□□□□□ -0.48
CASC4-209ENST00000559222 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
CASC4-209ENST00000559222 COX7A2LO14548 114 aa12.02□□□□□ -0.49
CASC4-209ENST00000559222 COX6A2Q02221 97 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms