RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 MRPL51Q4U2R6 128 aaKnown RBP13.82□□□□□ -0.2
CRNDE-205ENST00000558952 SDIM1Q6ZPB5 146 aa13.82□□□□□ -0.2
CRNDE-205ENST00000558952 MRPL52Q86TS9 123 aaKnown RBP13.82□□□□□ -0.2
CRNDE-205ENST00000558952 C15orf56Q8N910 161 aa13.82□□□□□ -0.2
CRNDE-205ENST00000558952 LINC00862A6NCI5 91 aa13.81□□□□□ -0.2
CRNDE-205ENST00000558952 RAB14P61106 215 aa13.81□□□□□ -0.2
CRNDE-205ENST00000558952 SRRM2Q9UQ35 2752 aaKnown RBP13.8□□□□□ -0.2
CRNDE-205ENST00000558952 F8W036 122 aa13.8□□□□□ -0.2
CRNDE-205ENST00000558952 CKS2P33552 79 aa13.8□□□□□ -0.2
CRNDE-205ENST00000558952 XCL1P47992 114 aa13.8□□□□□ -0.2
CRNDE-205ENST00000558952 HBBP68871 147 aa13.8□□□□□ -0.2
CRNDE-205ENST00000558952 SS18Q15532 418 aa13.8□□□□□ -0.2
CRNDE-205ENST00000558952 MRPL54Q6P161 138 aaKnown RBP13.8□□□□□ -0.2
CRNDE-205ENST00000558952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.8□□□□□ -0.2
CRNDE-205ENST00000558952 LINC00959A0A1B0GUT2 108 aa13.79□□□□□ -0.2
CRNDE-205ENST00000558952 CCL25O15444 150 aa13.79□□□□□ -0.2
CRNDE-205ENST00000558952 FOXI1Q12951 378 aa13.79□□□□□ -0.2
CRNDE-205ENST00000558952 HIGD2BQ4VC39 106 aa13.79□□□□□ -0.2
CRNDE-205ENST00000558952 ZNF664Q8N3J9 261 aa13.79□□□□□ -0.2
CRNDE-205ENST00000558952 CDC42SE2Q9NRR3 84 aa13.79□□□□□ -0.2
CRNDE-205ENST00000558952 SLPIP03973 132 aa13.78□□□□□ -0.2
CRNDE-205ENST00000558952 DPH3Q96FX2 82 aa13.78□□□□□ -0.2
CRNDE-205ENST00000558952 C20orf78Q9BR46 151 aa13.78□□□□□ -0.2
CRNDE-205ENST00000558952 TMEM18Q96B42 140 aa13.77□□□□□ -0.21
CRNDE-205ENST00000558952 GVQW2A0A096LPI5 108 aaPredicted RBP13.76□□□□□ -0.21
CRNDE-205ENST00000558952 TRBV24-1A0A075B6N3 115 aa13.75□□□□□ -0.21
CRNDE-205ENST00000558952 PANO1I0J062 215 aa13.75□□□□□ -0.21
CRNDE-205ENST00000558952 J3QL48 77 aa13.75□□□□□ -0.21
CRNDE-205ENST00000558952 TCAPO15273 167 aa13.75□□□□□ -0.21
CRNDE-205ENST00000558952 RPL37AP61513 92 aaKnown RBP13.75□□□□□ -0.21
CRNDE-205ENST00000558952 CSDC2Q9Y534 153 aaKnown RBP13.75□□□□□ -0.21
CRNDE-205ENST00000558952 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
CRNDE-205ENST00000558952 A0A1B0GXF2 115 aa13.74□□□□□ -0.21
CRNDE-205ENST00000558952 D6R8Y8 96 aa13.74□□□□□ -0.21
CRNDE-205ENST00000558952 TNFRSF6BO95407 300 aa13.74□□□□□ -0.21
CRNDE-205ENST00000558952 PNRC1Q12796 327 aaPredicted RBP13.74□□□□□ -0.21
CRNDE-205ENST00000558952 UBE2D4Q9Y2X8 147 aa13.74□□□□□ -0.21
CRNDE-205ENST00000558952 RPL32P62910 135 aaKnown RBP13.73□□□□□ -0.21
CRNDE-205ENST00000558952 CIRBPQ14011 172 aaKnown RBP13.73□□□□□ -0.21
CRNDE-205ENST00000558952 CD164L2Q6UWJ8 174 aa13.73□□□□□ -0.21
CRNDE-205ENST00000558952 ATP5L2Q7Z4Y8 100 aa13.73□□□□□ -0.21
CRNDE-205ENST00000558952 MYCBP2O75592 4640 aa13.72□□□□□ -0.21
CRNDE-205ENST00000558952 PPBPP02775 128 aa13.72□□□□□ -0.21
CRNDE-205ENST00000558952 KRTAP10-4P60372 401 aaPredicted RBP13.72□□□□□ -0.21
CRNDE-205ENST00000558952 FLG2Q5D862 2391 aaPredicted RBP13.72□□□□□ -0.21
CRNDE-205ENST00000558952 C1orf196B1AJZ1 125 aa13.71□□□□□ -0.21
CRNDE-205ENST00000558952 CHTF8P0CG12 524 aa13.71□□□□□ -0.21
CRNDE-205ENST00000558952 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.21
CRNDE-205ENST00000558952 PHOX2AO14813 284 aa13.7□□□□□ -0.22
CRNDE-205ENST00000558952 COX6A2Q02221 97 aa13.7□□□□□ -0.22
CRNDE-205ENST00000558952 SPACA4Q8TDM5 124 aa13.7□□□□□ -0.22
CRNDE-205ENST00000558952 ANAPC16Q96DE5 110 aa13.7□□□□□ -0.22
CRNDE-205ENST00000558952 TIMM21Q9BVV7 248 aa13.7□□□□□ -0.22
CRNDE-205ENST00000558952 ZNF561-AS1K7EIQ3 104 aa13.69□□□□□ -0.22
CRNDE-205ENST00000558952 NPYP01303 97 aa13.69□□□□□ -0.22
CRNDE-205ENST00000558952 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
CRNDE-205ENST00000558952 MALP21145 153 aa13.69□□□□□ -0.22
CRNDE-205ENST00000558952 RNASE13Q5GAN3 156 aaKnown RBP13.69□□□□□ -0.22
CRNDE-205ENST00000558952 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
CRNDE-205ENST00000558952 PKIGQ9Y2B9 76 aa13.69□□□□□ -0.22
CRNDE-205ENST00000558952 DMBT1Q9UGM3 2413 aaPredicted RBP13.69□□□□□ -0.22
CRNDE-205ENST00000558952 A0A087WYN8 130 aa13.68□□□□□ -0.22
CRNDE-205ENST00000558952 TRAV13-1A0A0B4J241 112 aa13.68□□□□□ -0.22
CRNDE-205ENST00000558952 Q6ZUT4 128 aa13.68□□□□□ -0.22
CRNDE-205ENST00000558952 KRTAP29-1A8MX34 341 aaPredicted RBP13.67□□□□□ -0.22
CRNDE-205ENST00000558952 COX7A2LO14548 114 aa13.67□□□□□ -0.22
CRNDE-205ENST00000558952 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
CRNDE-205ENST00000558952 PRSS3P2Q8NHM4 247 aa13.67□□□□□ -0.22
CRNDE-205ENST00000558952 IGKV2-24A0A0C4DH68 120 aa13.66□□□□□ -0.22
CRNDE-205ENST00000558952 CLLU1Q5K131 121 aa13.66□□□□□ -0.22
CRNDE-205ENST00000558952 CARD19Q96LW7 228 aa13.66□□□□□ -0.22
CRNDE-205ENST00000558952 RAB5AP20339 215 aa13.65□□□□□ -0.22
CRNDE-205ENST00000558952 RPL39P62891 51 aaKnown RBP13.65□□□□□ -0.22
CRNDE-205ENST00000558952 MAJINQ3KP22 176 aa13.65□□□□□ -0.22
CRNDE-205ENST00000558952 LINC00526Q96FQ7 95 aa13.65□□□□□ -0.22
CRNDE-205ENST00000558952 PRELID3AQ96N28 172 aa13.65□□□□□ -0.22
CRNDE-205ENST00000558952 SPANXA1Q9NS26 97 aa13.65□□□□□ -0.22
CRNDE-205ENST00000558952 HERC1Q15751 4861 aa13.64□□□□□ -0.23
CRNDE-205ENST00000558952 PLAC8Q9NZF1 115 aa13.64□□□□□ -0.23
CRNDE-205ENST00000558952 SYCNQ0VAF6 134 aa13.63□□□□□ -0.23
CRNDE-205ENST00000558952 LINC00474Q9P2X8 69 aa13.62□□□□□ -0.23
CRNDE-205ENST00000558952 APOMO95445 188 aa13.61□□□□□ -0.23
CRNDE-205ENST00000558952 C7orf33Q8WU49 177 aa13.61□□□□□ -0.23
CRNDE-205ENST00000558952 LAMTOR2Q9Y2Q5 125 aa13.61□□□□□ -0.23
CRNDE-205ENST00000558952 IGLV4-69A0A075B6H9 119 aa13.6□□□□□ -0.23
CRNDE-205ENST00000558952 A0A096LNI7 61 aa13.6□□□□□ -0.23
CRNDE-205ENST00000558952 OXTP01178 125 aa13.6□□□□□ -0.23
CRNDE-205ENST00000558952 MRPS36P82909 103 aaKnown RBP13.6□□□□□ -0.23
CRNDE-205ENST00000558952 C5orf38Q86SI9 138 aa13.6□□□□□ -0.23
CRNDE-205ENST00000558952 STPG4Q8N801 248 aa13.6□□□□□ -0.23
CRNDE-205ENST00000558952 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
CRNDE-205ENST00000558952 IFI27P40305 119 aaPredicted RBP13.59□□□□□ -0.23
CRNDE-205ENST00000558952 LOC389332A0A1B0GUA5 103 aa13.58□□□□□ -0.24
CRNDE-205ENST00000558952 UQCC3Q6UW78 93 aa13.58□□□□□ -0.24
CRNDE-205ENST00000558952 CAMK2N2Q96S95 79 aa13.58□□□□□ -0.24
CRNDE-205ENST00000558952 IFITM10A6NMD0 228 aa13.57□□□□□ -0.24
CRNDE-205ENST00000558952 OPRPNQ99935 248 aaPredicted RBP13.57□□□□□ -0.24
CRNDE-205ENST00000558952 PRSS47A8MTI9 375 aa13.56□□□□□ -0.24
CRNDE-205ENST00000558952 HNRNPA3P51991 378 aaKnown RBP13.56□□□□□ -0.24
CRNDE-205ENST00000558952 SPAG11BQ08648 103 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms