RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 AMMECR1LQ6DCA0 310 aa5.17□□□□□ -1.58
TRAF3-205ENST00000558700 FAM231DQ6ZW35 169 aa5.17□□□□□ -1.58
TRAF3-205ENST00000558700 GATD1Q8NB37 220 aa5.17□□□□□ -1.58
TRAF3-205ENST00000558700 BORCS7Q96B45 105 aa5.17□□□□□ -1.58
TRAF3-205ENST00000558700 RNF185Q96GF1 192 aa5.17□□□□□ -1.58
TRAF3-205ENST00000558700 SDHAF1A6NFY7 115 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 A8MWL6 223 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 H7C423 109 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 ZNF25P17030 456 aaPredicted RBP5.16□□□□□ -1.58
TRAF3-205ENST00000558700 CIRBPQ14011 172 aaKnown RBP5.16□□□□□ -1.58
TRAF3-205ENST00000558700 LBHQ53QV2 105 aaPredicted RBP5.16□□□□□ -1.58
TRAF3-205ENST00000558700 RNASEKQ6P5S7 137 aaKnown RBP5.16□□□□□ -1.58
TRAF3-205ENST00000558700 ALKAL2Q6UX46 152 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 SDIM1Q6ZPB5 146 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 Q75L30 129 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 GTSF1Q8WW33 167 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 RPL39LQ96EH5 51 aaKnown RBP5.16□□□□□ -1.58
TRAF3-205ENST00000558700 URB1-AS1Q96HZ7 61 aa5.16□□□□□ -1.58
TRAF3-205ENST00000558700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.15□□□□□ -1.59
TRAF3-205ENST00000558700 IGKV3OR2-268A0A0C4DH90 116 aa5.15□□□□□ -1.59
TRAF3-205ENST00000558700 IGKV2-29A2NJV5 120 aaPredicted RBP5.15□□□□□ -1.59
TRAF3-205ENST00000558700 CEBPGP53567 150 aa5.15□□□□□ -1.59
TRAF3-205ENST00000558700 C15orf56Q8N910 161 aa5.15□□□□□ -1.59
TRAF3-205ENST00000558700 CHCHD10Q8WYQ3 142 aaPredicted RBP5.15□□□□□ -1.59
TRAF3-205ENST00000558700 BTF3L4Q96K17 158 aa5.15□□□□□ -1.59
TRAF3-205ENST00000558700 SMIM7Q9BQ49 75 aa5.15□□□□□ -1.59
TRAF3-205ENST00000558700 PKIGQ9Y2B9 76 aa5.15□□□□□ -1.59
TRAF3-205ENST00000558700 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
TRAF3-205ENST00000558700 TRBV6-5A0A0K0K1A5 114 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 PANO1I0J062 215 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 I3L3M4 83 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 NDUFS6O75380 124 aaKnown RBP5.14□□□□□ -1.59
TRAF3-205ENST00000558700 FGF6P10767 208 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 PNRC1Q12796 327 aaPredicted RBP5.14□□□□□ -1.59
TRAF3-205ENST00000558700 LYPD6BQ8NI32 183 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 SPACA4Q8TDM5 124 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 TMEM101Q96IK0 257 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 FAM210AQ96ND0 272 aa5.14□□□□□ -1.59
TRAF3-205ENST00000558700 A0A087WYN8 130 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 A0A1B0GUT8 65 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 HIGD1CA8MV81 97 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 CHTF8P0CG12 524 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 PMCHP20382 165 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 RPS10P46783 165 aaKnown RBP5.13□□□□□ -1.59
TRAF3-205ENST00000558700 HIGD2BQ4VC39 106 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 OR5A1Q8NGJ0 315 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 C7orf33Q8WU49 177 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 TSKUQ8WUA8 353 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 MRAP2Q96G30 205 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 EIF5A2Q9GZV4 153 aaKnown RBP5.13□□□□□ -1.59
TRAF3-205ENST00000558700 ST20Q9HBF5 79 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 TMEM242Q9NWH2 141 aa5.13□□□□□ -1.59
TRAF3-205ENST00000558700 C7orf77A4D0Y5 90 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 ZNF727A8MUV8 499 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 SLPIP03973 132 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 HNRNPA3P51991 378 aaKnown RBP5.12□□□□□ -1.59
TRAF3-205ENST00000558700 FOXA3P55318 350 aaPredicted RBP5.12□□□□□ -1.59
TRAF3-205ENST00000558700 LINC01551Q86U37 167 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 DPH3Q96FX2 82 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 OSTCQ9NRP0 149 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 PLAC8Q9NZF1 115 aa5.12□□□□□ -1.59
TRAF3-205ENST00000558700 CCL25O15444 150 aa5.11□□□□□ -1.59
TRAF3-205ENST00000558700 TSHBP01222 138 aa5.11□□□□□ -1.59
TRAF3-205ENST00000558700 XCL1P47992 114 aa5.11□□□□□ -1.59
TRAF3-205ENST00000558700 SMAGPQ0VAQ4 97 aa5.11□□□□□ -1.59
TRAF3-205ENST00000558700 Q6ZRU5 148 aa5.11□□□□□ -1.59
TRAF3-205ENST00000558700 MRPL52Q86TS9 123 aaKnown RBP5.11□□□□□ -1.59
TRAF3-205ENST00000558700 IGHV1-58A0A0C4DH39 117 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 IGKV2-24A0A0C4DH68 120 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 TRBV27A0A0K0K1C4 114 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 PPP1R17O96001 155 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 ESDP10768 282 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 FCER1GP30273 86 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 COX6A2Q02221 97 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 RIGQ13278 110 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 SS18Q15532 418 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 MAJINQ3KP22 176 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 AMN1Q8IY45 258 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 CARD19Q96LW7 228 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 LINC00474Q9P2X8 69 aa5.1□□□□□ -1.59
TRAF3-205ENST00000558700 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 LINC00959A0A1B0GUT2 108 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 PHOX2AO14813 284 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 PRSS2P07478 247 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 SRP19P09132 144 aaKnown RBP5.09□□□□□ -1.59
TRAF3-205ENST00000558700 RAB4AP20338 218 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 POLR2KP53803 58 aaKnown RBP5.09□□□□□ -1.59
TRAF3-205ENST00000558700 FAM74A3Q4VXF1 159 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 ISOC2Q96AB3 205 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 KIR2DL4Q99706 377 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 V9GYV3 84 aa5.09□□□□□ -1.59
TRAF3-205ENST00000558700 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.59
TRAF3-205ENST00000558700 FAT3Q8TDW7 4589 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 A0A096LNI7 61 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 PPP1R2P9O14990 202 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 ATP6V1G1O75348 118 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 GAS8-AS1O95177 125 aa5.08□□□□□ -1.6
TRAF3-205ENST00000558700 PRR3P79522 188 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms