RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
HERC1-202ENST00000558324 CCL25O15444 150 aa7.61□□□□□ -1.19
HERC1-202ENST00000558324 FCER1GP30273 86 aa7.61□□□□□ -1.19
HERC1-202ENST00000558324 POLR2KP53803 58 aaKnown RBP7.61□□□□□ -1.19
HERC1-202ENST00000558324 FOXI1Q12951 378 aa7.61□□□□□ -1.19
HERC1-202ENST00000558324 PEA15Q15121 130 aa7.61□□□□□ -1.19
HERC1-202ENST00000558324 TRBV27A0A0K0K1C4 114 aa7.6□□□□□ -1.19
HERC1-202ENST00000558324 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
HERC1-202ENST00000558324 CAMPP49913 170 aa7.6□□□□□ -1.19
HERC1-202ENST00000558324 HNRNPA3P51991 378 aaKnown RBP7.6□□□□□ -1.19
HERC1-202ENST00000558324 COX6A2Q02221 97 aa7.6□□□□□ -1.19
HERC1-202ENST00000558324 NRACQ8N912 160 aa7.6□□□□□ -1.19
HERC1-202ENST00000558324 A0A087WYN8 130 aa7.59□□□□□ -1.19
HERC1-202ENST00000558324 GVQW2A0A096LPI5 108 aaPredicted RBP7.59□□□□□ -1.19
HERC1-202ENST00000558324 IGKV2-24A0A0C4DH68 120 aa7.59□□□□□ -1.19
HERC1-202ENST00000558324 VCYO14598 125 aa7.59□□□□□ -1.19
HERC1-202ENST00000558324 SUMO2P61956 95 aaKnown RBP7.59□□□□□ -1.19
HERC1-202ENST00000558324 CIRBPQ14011 172 aaKnown RBP7.59□□□□□ -1.19
HERC1-202ENST00000558324 MRPL51Q4U2R6 128 aaKnown RBP7.59□□□□□ -1.19
HERC1-202ENST00000558324 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
HERC1-202ENST00000558324 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
HERC1-202ENST00000558324 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
HERC1-202ENST00000558324 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 PPP1R17O96001 155 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 SS18Q15532 418 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 RNASE13Q5GAN3 156 aaKnown RBP7.58□□□□□ -1.2
HERC1-202ENST00000558324 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 MRPL54Q6P161 138 aaKnown RBP7.58□□□□□ -1.2
HERC1-202ENST00000558324 MRPL52Q86TS9 123 aaKnown RBP7.58□□□□□ -1.2
HERC1-202ENST00000558324 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 PRSS3P2Q8NHM4 247 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 KIR2DL4Q99706 377 aa7.58□□□□□ -1.2
HERC1-202ENST00000558324 LRP1Q07954 4544 aaKnown RBP7.58□□□□□ -1.2
HERC1-202ENST00000558324 MAJINQ3KP22 176 aa7.57□□□□□ -1.2
HERC1-202ENST00000558324 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 IGHV1-58A0A0C4DH39 117 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 PPP1R2P9O14990 202 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 CKS2P33552 79 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 UBE2D4Q9Y2X8 147 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
HERC1-202ENST00000558324 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
HERC1-202ENST00000558324 A0A1B0GW15 77 aa7.55□□□□□ -1.2
HERC1-202ENST00000558324 CD164L2Q6UWJ8 174 aa7.55□□□□□ -1.2
HERC1-202ENST00000558324 Q6ZUT4 128 aa7.55□□□□□ -1.2
HERC1-202ENST00000558324 A0A096LNI7 61 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 D6R8Y8 96 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 ZNF561-AS1K7EIQ3 104 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 OXTP01178 125 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 HBBP68871 147 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 STPG4Q8N801 248 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
HERC1-202ENST00000558324 LINC00862A6NCI5 91 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 C1orf196B1AJZ1 125 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 F8W036 122 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 PHOX2AO14813 284 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 S100A8P05109 93 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 MALP21145 153 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 C20orf78Q9BR46 151 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
HERC1-202ENST00000558324 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.21
HERC1-202ENST00000558324 A0A1B0GXF2 115 aa7.52□□□□□ -1.21
HERC1-202ENST00000558324 COX7A2LO14548 114 aa7.52□□□□□ -1.21
HERC1-202ENST00000558324 NPYP01303 97 aa7.52□□□□□ -1.21
HERC1-202ENST00000558324 RPL39P62891 51 aaKnown RBP7.52□□□□□ -1.21
HERC1-202ENST00000558324 SYCNQ0VAF6 134 aa7.52□□□□□ -1.21
HERC1-202ENST00000558324 CSDC2Q9Y534 153 aaKnown RBP7.52□□□□□ -1.21
HERC1-202ENST00000558324 IGLV4-69A0A075B6H9 119 aa7.51□□□□□ -1.21
HERC1-202ENST00000558324 TCAPO15273 167 aa7.51□□□□□ -1.21
HERC1-202ENST00000558324 C5orf38Q86SI9 138 aa7.51□□□□□ -1.21
HERC1-202ENST00000558324 RPL32P62910 135 aaKnown RBP7.5□□□□□ -1.21
HERC1-202ENST00000558324 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
HERC1-202ENST00000558324 TIMM21Q9BVV7 248 aa7.5□□□□□ -1.21
HERC1-202ENST00000558324 PKIGQ9Y2B9 76 aa7.5□□□□□ -1.21
HERC1-202ENST00000558324 RAB14P61106 215 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 Q6ZRU5 148 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 ATP5L2Q7Z4Y8 100 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 ORMDL3Q8N138 153 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
HERC1-202ENST00000558324 PPBPP02775 128 aa7.48□□□□□ -1.21
HERC1-202ENST00000558324 PRR3P79522 188 aaKnown RBP7.48□□□□□ -1.21
HERC1-202ENST00000558324 SPAG11BQ08648 103 aa7.48□□□□□ -1.21
HERC1-202ENST00000558324 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
HERC1-202ENST00000558324 PRELID3AQ96N28 172 aa7.48□□□□□ -1.21
HERC1-202ENST00000558324 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
HERC1-202ENST00000558324 LOC389332A0A1B0GUA5 103 aa7.47□□□□□ -1.21
HERC1-202ENST00000558324 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
HERC1-202ENST00000558324 APOMO95445 188 aa7.47□□□□□ -1.21
HERC1-202ENST00000558324 RAB5AP20339 215 aa7.47□□□□□ -1.21
HERC1-202ENST00000558324 SERTAD4-AS1Q5TG53 156 aa7.47□□□□□ -1.21
HERC1-202ENST00000558324 FAM104AQ969W3 186 aa7.47□□□□□ -1.21
HERC1-202ENST00000558324 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.22
HERC1-202ENST00000558324 MT-ND4LP03901 98 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms