RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 TRBV27A0A0K0K1C4 114 aa6.53□□□□□ -1.36
USP3-207ENST00000558218 RAB4AP20338 218 aa6.53□□□□□ -1.36
USP3-207ENST00000558218 POLR2KP53803 58 aaKnown RBP6.53□□□□□ -1.36
USP3-207ENST00000558218 SDIM1Q6ZPB5 146 aa6.53□□□□□ -1.36
USP3-207ENST00000558218 ISOC2Q96AB3 205 aa6.53□□□□□ -1.36
USP3-207ENST00000558218 RPL39LQ96EH5 51 aaKnown RBP6.53□□□□□ -1.36
USP3-207ENST00000558218 V9GYV3 84 aa6.53□□□□□ -1.36
USP3-207ENST00000558218 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
USP3-207ENST00000558218 A0A1B0GVG6 124 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 VCYO14598 125 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 FGF6P10767 208 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 ESDP10768 282 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 RNF151Q2KHN1 245 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 NUP35Q8NFH5 326 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 BTF3L4Q96K17 158 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 NAT8Q9UHE5 227 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
USP3-207ENST00000558218 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
USP3-207ENST00000558218 A0A1B0GW15 77 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 hDV102S1A0JD36 115 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 LINC00862A6NCI5 91 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
USP3-207ENST00000558218 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
USP3-207ENST00000558218 OR5A1Q8NGJ0 315 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 RNF185Q96GF1 192 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
USP3-207ENST00000558218 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
USP3-207ENST00000558218 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
USP3-207ENST00000558218 SMIM27A0A1W2PRY6 76 aa6.5□□□□□ -1.37
USP3-207ENST00000558218 CCL25O15444 150 aa6.5□□□□□ -1.37
USP3-207ENST00000558218 CIRBPQ14011 172 aaKnown RBP6.5□□□□□ -1.37
USP3-207ENST00000558218 MRPL52Q86TS9 123 aaKnown RBP6.5□□□□□ -1.37
USP3-207ENST00000558218 CSDC2Q9Y534 153 aaKnown RBP6.5□□□□□ -1.37
USP3-207ENST00000558218 FAT1Q14517 4588 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
USP3-207ENST00000558218 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
USP3-207ENST00000558218 GAGE12HA6NDE8 117 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
USP3-207ENST00000558218 PPP1R2P9O14990 202 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 TCAPO15273 167 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 TSHBP01222 138 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 S100A8P05109 93 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 AMN1Q8IY45 258 aa6.49□□□□□ -1.37
USP3-207ENST00000558218 CHCHD10Q8WYQ3 142 aaPredicted RBP6.49□□□□□ -1.37
USP3-207ENST00000558218 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 C9JQL5 133 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 GAS8-AS1O95177 125 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 SLPIP03973 132 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 RPS10P46783 165 aaKnown RBP6.48□□□□□ -1.37
USP3-207ENST00000558218 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
USP3-207ENST00000558218 SUMO2P61956 95 aaKnown RBP6.48□□□□□ -1.37
USP3-207ENST00000558218 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
USP3-207ENST00000558218 ADIRFQ15847 76 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 FAM104BQ5XKR9 115 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 KIR2DL4Q99706 377 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
USP3-207ENST00000558218 DNAH8Q96JB1 4490 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
USP3-207ENST00000558218 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 C7orf77A4D0Y5 90 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 SS18Q15532 418 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 ZNF664Q8N3J9 261 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 NRACQ8N912 160 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 TMEM18Q96B42 140 aa6.47□□□□□ -1.37
USP3-207ENST00000558218 IGKV3OR2-268A0A0C4DH90 116 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 F8W036 122 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 OXTP01178 125 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 PPBPP02775 128 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 FCER1GP30273 86 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 FOXI1Q12951 378 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 CD164L2Q6UWJ8 174 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 DPH3Q96FX2 82 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 TMEM242Q9NWH2 141 aa6.46□□□□□ -1.38
USP3-207ENST00000558218 IGHV1-58A0A0C4DH39 117 aa6.45□□□□□ -1.38
USP3-207ENST00000558218 C1orf196B1AJZ1 125 aa6.45□□□□□ -1.38
USP3-207ENST00000558218 PHOX2AO14813 284 aa6.45□□□□□ -1.38
USP3-207ENST00000558218 CKS2P33552 79 aa6.45□□□□□ -1.38
USP3-207ENST00000558218 CAMPP49913 170 aa6.45□□□□□ -1.38
USP3-207ENST00000558218 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
USP3-207ENST00000558218 MRPL51Q4U2R6 128 aaKnown RBP6.45□□□□□ -1.38
USP3-207ENST00000558218 HBBP68871 147 aa6.44□□□□□ -1.38
USP3-207ENST00000558218 LINC00474Q9P2X8 69 aa6.44□□□□□ -1.38
USP3-207ENST00000558218 HERC1Q15751 4861 aa6.44□□□□□ -1.38
USP3-207ENST00000558218 UBR4Q5T4S7 5183 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 A0A087WYN8 130 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 SMKR1H3BMG3 65 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 PANO1I0J062 215 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 TNFRSF6BO95407 300 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 XCL1P47992 114 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 RAB14P61106 215 aa6.43□□□□□ -1.38
USP3-207ENST00000558218 PNRC1Q12796 327 aaPredicted RBP6.43□□□□□ -1.38
USP3-207ENST00000558218 ATP5L2Q7Z4Y8 100 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms