RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 H7C423 109 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 TSHBP01222 138 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 FGF6P10767 208 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 ESDP10768 282 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 PMCHP20382 165 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 C9orf163Q8N9P6 203 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 MRAP2Q96G30 205 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 NAT8BQ9UHF3 227 aa5.67□□□□□ -1.5
SNRPA1-206ENST00000558059 TRBV27A0A0K0K1C4 114 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 SMKR1H3BMG3 65 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 EIF4EBP3O60516 100 aaPredicted RBP5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 SLPIP03973 132 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 AMMECR1LQ6DCA0 310 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 RNASEKQ6P5S7 137 aaKnown RBP5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 NRACQ8N912 160 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 CIRBP-AS1Q8TBR5 109 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 TMEM242Q9NWH2 141 aa5.66□□□□□ -1.5
SNRPA1-206ENST00000558059 IGKV3OR2-268A0A0C4DH90 116 aa5.65□□□□□ -1.5
SNRPA1-206ENST00000558059 GAGE12HA6NDE8 117 aa5.65□□□□□ -1.5
SNRPA1-206ENST00000558059 CNBPP62633 177 aaKnown RBP5.65□□□□□ -1.5
SNRPA1-206ENST00000558059 MRPL51Q4U2R6 128 aaKnown RBP5.65□□□□□ -1.5
SNRPA1-206ENST00000558059 FAM104BQ5XKR9 115 aa5.65□□□□□ -1.5
SNRPA1-206ENST00000558059 SDIM1Q6ZPB5 146 aa5.65□□□□□ -1.5
SNRPA1-206ENST00000558059 hDV102S1A0JD36 115 aa5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 VCYO14598 125 aa5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 ZNF25P17030 456 aaPredicted RBP5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 C15orf56Q8N910 161 aa5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 OR5A1Q8NGJ0 315 aa5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 CHCHD10Q8WYQ3 142 aaPredicted RBP5.64□□□□□ -1.51
SNRPA1-206ENST00000558059 A0A1B0GW15 77 aa5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 PANO1I0J062 215 aa5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 PPP1R17O96001 155 aa5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 CAMPP49913 170 aa5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 MRPL52Q86TS9 123 aaKnown RBP5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
SNRPA1-206ENST00000558059 TRBV24-1A0A075B6N3 115 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 LINC00959A0A1B0GUT2 108 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 A0A1B0GXF2 115 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 C7orf77A4D0Y5 90 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 FOXI1Q12951 378 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 MRPL54Q6P161 138 aaKnown RBP5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 CFAP161Q6P656 301 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 TMEM101Q96IK0 257 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 BTF3L4Q96K17 158 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 AP5S1Q9NUS5 200 aa5.62□□□□□ -1.51
SNRPA1-206ENST00000558059 LINC00862A6NCI5 91 aa5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 PPP1R2P9O14990 202 aa5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 RPL32P62910 135 aaKnown RBP5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 HBBP68871 147 aa5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 CIRBPQ14011 172 aaKnown RBP5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 HIGD2BQ4VC39 106 aa5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 C20orf78Q9BR46 151 aa5.61□□□□□ -1.51
SNRPA1-206ENST00000558059 IGHV3-64A0A075B6Q5 118 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 GVQW2A0A096LPI5 108 aaPredicted RBP5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 CCL25O15444 150 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 TNFRSF6BO95407 300 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 S100A8P05109 93 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 FCER1GP30273 86 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 CKS2P33552 79 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 XCL1P47992 114 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 RAB14P61106 215 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 KIR2DL4Q99706 377 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 UBE2D4Q9Y2X8 147 aa5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
SNRPA1-206ENST00000558059 D6R8Y8 96 aa5.59□□□□□ -1.51
SNRPA1-206ENST00000558059 F8W036 122 aa5.59□□□□□ -1.51
SNRPA1-206ENST00000558059 NPYP01303 97 aa5.59□□□□□ -1.51
SNRPA1-206ENST00000558059 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
SNRPA1-206ENST00000558059 SS18Q15532 418 aa5.59□□□□□ -1.51
SNRPA1-206ENST00000558059 CD164L2Q6UWJ8 174 aa5.59□□□□□ -1.51
SNRPA1-206ENST00000558059 IGHV1-58A0A0C4DH39 117 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 PHOX2AO14813 284 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 PPBPP02775 128 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 COX6A2Q02221 97 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 PNRC1Q12796 327 aaPredicted RBP5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 RNASE13Q5GAN3 156 aaKnown RBP5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 CLLU1Q5K131 121 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 ATP5L2Q7Z4Y8 100 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 FAM104AQ969W3 186 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 LINC00526Q96FQ7 95 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 TIMM21Q9BVV7 248 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
SNRPA1-206ENST00000558059 A0A087WYN8 130 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 KRTAP29-1A8MX34 341 aaPredicted RBP5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 TCAPO15273 167 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 MT-ND4LP03901 98 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 RPL37AP61513 92 aaKnown RBP5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 RPL39P62891 51 aaKnown RBP5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 IFITM2Q01629 132 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms