RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SMIM7Q9BQ49 75 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
SNRPA1-204ENST00000558020 LINC00959A0A1B0GUT2 108 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 HIGD1CA8MV81 97 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 PHOX2AO14813 284 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 CCL25O15444 150 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 ESDP10768 282 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 STPG4Q8N801 248 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
SNRPA1-204ENST00000558020 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 VCYO14598 125 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 TSHBP01222 138 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 ZNF664Q8N3J9 261 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 OSTCQ9NRP0 149 aa8.59□□□□□ -1.03
SNRPA1-204ENST00000558020 RAB4AP20338 218 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 FCER1GP30273 86 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 RIGQ13278 110 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 CD164L2Q6UWJ8 174 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 LINC01551Q86U37 167 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 CDC42SE2Q9NRR3 84 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 TMEM242Q9NWH2 141 aa8.58□□□□□ -1.04
SNRPA1-204ENST00000558020 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
SNRPA1-204ENST00000558020 C1orf196B1AJZ1 125 aa8.57□□□□□ -1.04
SNRPA1-204ENST00000558020 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
SNRPA1-204ENST00000558020 MALP21145 153 aa8.57□□□□□ -1.04
SNRPA1-204ENST00000558020 ISOC2Q96AB3 205 aa8.57□□□□□ -1.04
SNRPA1-204ENST00000558020 CARD19Q96LW7 228 aa8.57□□□□□ -1.04
SNRPA1-204ENST00000558020 PKHD1L1Q86WI1 4243 aa8.56□□□□□ -1.04
SNRPA1-204ENST00000558020 SYCNQ0VAF6 134 aa8.56□□□□□ -1.04
SNRPA1-204ENST00000558020 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
SNRPA1-204ENST00000558020 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 A0A096LNI7 61 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 FAM74A3Q4VXF1 159 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 AMN1Q8IY45 258 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
SNRPA1-204ENST00000558020 COX7A2LO14548 114 aa8.54□□□□□ -1.04
SNRPA1-204ENST00000558020 PPP1R2P9O14990 202 aa8.54□□□□□ -1.04
SNRPA1-204ENST00000558020 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-204ENST00000558020 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-204ENST00000558020 NAT8BQ9UHF3 227 aa8.54□□□□□ -1.04
SNRPA1-204ENST00000558020 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-204ENST00000558020 CAMPP49913 170 aa8.53□□□□□ -1.04
SNRPA1-204ENST00000558020 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
SNRPA1-204ENST00000558020 NUP35Q8NFH5 326 aa8.53□□□□□ -1.04
SNRPA1-204ENST00000558020 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
SNRPA1-204ENST00000558020 LINC01600Q96MT4 127 aa8.53□□□□□ -1.04
SNRPA1-204ENST00000558020 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
SNRPA1-204ENST00000558020 TCAPO15273 167 aa8.52□□□□□ -1.05
SNRPA1-204ENST00000558020 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
SNRPA1-204ENST00000558020 Q6ZRP5 223 aa8.52□□□□□ -1.05
SNRPA1-204ENST00000558020 V9GYV3 84 aa8.52□□□□□ -1.05
SNRPA1-204ENST00000558020 IGLV4-69A0A075B6H9 119 aa8.51□□□□□ -1.05
SNRPA1-204ENST00000558020 A0A1B0GW15 77 aa8.51□□□□□ -1.05
SNRPA1-204ENST00000558020 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
SNRPA1-204ENST00000558020 APOMO95445 188 aa8.51□□□□□ -1.05
SNRPA1-204ENST00000558020 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 SMKR1H3BMG3 65 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 PTTG1IPP53801 180 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 UBR4Q5T4S7 5183 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 NRACQ8N912 160 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 C20orf78Q9BR46 151 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
SNRPA1-204ENST00000558020 S100A8P05109 93 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 CKS2P33552 79 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 ADIRFQ15847 76 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 FAM104BQ5XKR9 115 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 NAT8Q9UHE5 227 aa8.49□□□□□ -1.05
SNRPA1-204ENST00000558020 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
SNRPA1-204ENST00000558020 F8W036 122 aa8.48□□□□□ -1.05
SNRPA1-204ENST00000558020 RPL23P62829 140 aaKnown RBP8.48□□□□□ -1.05
SNRPA1-204ENST00000558020 PEA15Q15121 130 aa8.48□□□□□ -1.05
SNRPA1-204ENST00000558020 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
SNRPA1-204ENST00000558020 A0A0J9YXV3 536 aa8.47□□□□□ -1.05
SNRPA1-204ENST00000558020 SMIM27A0A1W2PRY6 76 aa8.47□□□□□ -1.05
SNRPA1-204ENST00000558020 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
SNRPA1-204ENST00000558020 C5orf38Q86SI9 138 aa8.47□□□□□ -1.05
SNRPA1-204ENST00000558020 SMDT1Q9H4I9 107 aa8.47□□□□□ -1.05
SNRPA1-204ENST00000558020 F8WDY8 70 aa8.46□□□□□ -1.06
SNRPA1-204ENST00000558020 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
SNRPA1-204ENST00000558020 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.06
SNRPA1-204ENST00000558020 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNRPA1-204ENST00000558020 OR10D4PQ8NGN7 298 aa8.45□□□□□ -1.06
SNRPA1-204ENST00000558020 SPANXA1Q9NS26 97 aa8.45□□□□□ -1.06
SNRPA1-204ENST00000558020 TNFRSF6BO95407 300 aa8.44□□□□□ -1.06
SNRPA1-204ENST00000558020 PPBPP02775 128 aa8.44□□□□□ -1.06
SNRPA1-204ENST00000558020 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-204ENST00000558020 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
SNRPA1-204ENST00000558020 Q6ZUT4 128 aa8.44□□□□□ -1.06
SNRPA1-204ENST00000558020 IMMP2LQ96T52 175 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms