RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 C20orf203Q8NBC4 194 aa7.46□□□□□ -1.22
LINC00648-204ENST00000557749 ISOC2Q96AB3 205 aa7.46□□□□□ -1.22
LINC00648-204ENST00000557749 PKIGQ9Y2B9 76 aa7.46□□□□□ -1.22
LINC00648-204ENST00000557749 A0A1B0GVG6 124 aa7.45□□□□□ -1.22
LINC00648-204ENST00000557749 PPP1R2P9O14990 202 aa7.45□□□□□ -1.22
LINC00648-204ENST00000557749 RAB14P61106 215 aa7.45□□□□□ -1.22
LINC00648-204ENST00000557749 RPL39LQ96EH5 51 aaKnown RBP7.45□□□□□ -1.22
LINC00648-204ENST00000557749 CHAC1Q9BUX1 264 aa7.45□□□□□ -1.22
LINC00648-204ENST00000557749 V9GYV3 84 aa7.45□□□□□ -1.22
LINC00648-204ENST00000557749 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
LINC00648-204ENST00000557749 RNASEKQ6P5S7 137 aaKnown RBP7.44□□□□□ -1.22
LINC00648-204ENST00000557749 NUP35Q8NFH5 326 aa7.44□□□□□ -1.22
LINC00648-204ENST00000557749 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
LINC00648-204ENST00000557749 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 LINC00862A6NCI5 91 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 F8W036 122 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 VCYO14598 125 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 SMR3BP02814 79 aaPredicted RBP7.43□□□□□ -1.22
LINC00648-204ENST00000557749 SLPIP03973 132 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 FGF6P10767 208 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
LINC00648-204ENST00000557749 C9orf163Q8N9P6 203 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 TMEM18Q96B42 140 aa7.43□□□□□ -1.22
LINC00648-204ENST00000557749 SMIM27A0A1W2PRY6 76 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 hDV102S1A0JD36 115 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 CCL25O15444 150 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 PRSS1P07477 247 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 RAB4AP20338 218 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 MALP21145 153 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 FCER1GP30273 86 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 KRTAP26-1Q6PEX3 210 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 SCXQ7RTU7 201 aa7.42□□□□□ -1.22
LINC00648-204ENST00000557749 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
LINC00648-204ENST00000557749 PNRC1Q12796 327 aaPredicted RBP7.41□□□□□ -1.22
LINC00648-204ENST00000557749 MRPL52Q86TS9 123 aaKnown RBP7.41□□□□□ -1.22
LINC00648-204ENST00000557749 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
LINC00648-204ENST00000557749 C20orf78Q9BR46 151 aa7.41□□□□□ -1.22
LINC00648-204ENST00000557749 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
LINC00648-204ENST00000557749 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
LINC00648-204ENST00000557749 PPBPP02775 128 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 ESDP10768 282 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
LINC00648-204ENST00000557749 HBBP68871 147 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 SS18Q15532 418 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 FAM104BQ5XKR9 115 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 DEFB104AQ8WTQ1 72 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 RNF185Q96GF1 192 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
LINC00648-204ENST00000557749 IGKV3OR2-268A0A0C4DH90 116 aa7.39□□□□□ -1.23
LINC00648-204ENST00000557749 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
LINC00648-204ENST00000557749 TSHBP01222 138 aa7.39□□□□□ -1.23
LINC00648-204ENST00000557749 RPL32P62910 135 aaKnown RBP7.39□□□□□ -1.23
LINC00648-204ENST00000557749 HAMPP81172 84 aa7.39□□□□□ -1.23
LINC00648-204ENST00000557749 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
LINC00648-204ENST00000557749 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
LINC00648-204ENST00000557749 PHOX2AO14813 284 aa7.38□□□□□ -1.23
LINC00648-204ENST00000557749 CKS2P33552 79 aa7.38□□□□□ -1.23
LINC00648-204ENST00000557749 CAMPP49913 170 aa7.38□□□□□ -1.23
LINC00648-204ENST00000557749 LINC01620Q4KN68 170 aa7.38□□□□□ -1.23
LINC00648-204ENST00000557749 TRBV24-1A0A075B6N3 115 aa7.37□□□□□ -1.23
LINC00648-204ENST00000557749 C9JQL5 133 aa7.37□□□□□ -1.23
LINC00648-204ENST00000557749 ZNF664Q8N3J9 261 aa7.37□□□□□ -1.23
LINC00648-204ENST00000557749 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
LINC00648-204ENST00000557749 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
LINC00648-204ENST00000557749 FAT1Q14517 4588 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 GVQW2A0A096LPI5 108 aaPredicted RBP7.36□□□□□ -1.23
LINC00648-204ENST00000557749 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 MT-ND4LP03901 98 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 RPS10P46783 165 aaKnown RBP7.36□□□□□ -1.23
LINC00648-204ENST00000557749 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
LINC00648-204ENST00000557749 NRACQ8N912 160 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 CDC42SE2Q9NRR3 84 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 LINC00474Q9P2X8 69 aa7.36□□□□□ -1.23
LINC00648-204ENST00000557749 LINC00959A0A1B0GUT2 108 aa7.35□□□□□ -1.23
LINC00648-204ENST00000557749 XCL1P47992 114 aa7.35□□□□□ -1.23
LINC00648-204ENST00000557749 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
LINC00648-204ENST00000557749 SDIM1Q6ZPB5 146 aa7.35□□□□□ -1.23
LINC00648-204ENST00000557749 LAMTOR2Q9Y2Q5 125 aa7.35□□□□□ -1.23
LINC00648-204ENST00000557749 VPS13BQ7Z7G8 4022 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 FOXI1Q12951 378 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 CIRBPQ14011 172 aaKnown RBP7.34□□□□□ -1.23
LINC00648-204ENST00000557749 MRPL54Q6P161 138 aaKnown RBP7.34□□□□□ -1.23
LINC00648-204ENST00000557749 ORMDL3Q8N138 153 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
LINC00648-204ENST00000557749 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
LINC00648-204ENST00000557749 A0A1B0GXF2 115 aa7.33□□□□□ -1.24
LINC00648-204ENST00000557749 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
LINC00648-204ENST00000557749 GAS8-AS1O95177 125 aa7.33□□□□□ -1.24
LINC00648-204ENST00000557749 TNFRSF6BO95407 300 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms