RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SS18Q15532 418 aa9.99□□□□□ -0.81
TUBB3-213ENST00000557262 AKAP14Q86UN6 197 aa9.99□□□□□ -0.81
TUBB3-213ENST00000557262 TSKUQ8WUA8 353 aa9.99□□□□□ -0.81
TUBB3-213ENST00000557262 MRAP2Q96G30 205 aa9.99□□□□□ -0.81
TUBB3-213ENST00000557262 EIF5A2Q9GZV4 153 aaKnown RBP9.99□□□□□ -0.81
TUBB3-213ENST00000557262 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
TUBB3-213ENST00000557262 RAB4AP20338 218 aa9.98□□□□□ -0.81
TUBB3-213ENST00000557262 MRPL52Q86TS9 123 aaKnown RBP9.98□□□□□ -0.81
TUBB3-213ENST00000557262 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
TUBB3-213ENST00000557262 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
TUBB3-213ENST00000557262 TMEM242Q9NWH2 141 aa9.98□□□□□ -0.81
TUBB3-213ENST00000557262 LINC00474Q9P2X8 69 aa9.98□□□□□ -0.81
TUBB3-213ENST00000557262 A0A096LNI7 61 aa9.97□□□□□ -0.81
TUBB3-213ENST00000557262 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
TUBB3-213ENST00000557262 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
TUBB3-213ENST00000557262 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
TUBB3-213ENST00000557262 OSTCQ9NRP0 149 aa9.97□□□□□ -0.81
TUBB3-213ENST00000557262 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
TUBB3-213ENST00000557262 ZNF727A8MUV8 499 aa9.96□□□□□ -0.82
TUBB3-213ENST00000557262 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
TUBB3-213ENST00000557262 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
TUBB3-213ENST00000557262 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
TUBB3-213ENST00000557262 VCYO14598 125 aa9.95□□□□□ -0.82
TUBB3-213ENST00000557262 AMN1Q8IY45 258 aa9.95□□□□□ -0.82
TUBB3-213ENST00000557262 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
TUBB3-213ENST00000557262 C7orf77A4D0Y5 90 aa9.94□□□□□ -0.82
TUBB3-213ENST00000557262 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
TUBB3-213ENST00000557262 RIGQ13278 110 aa9.94□□□□□ -0.82
TUBB3-213ENST00000557262 TNXBP22105 4242 aa9.94□□□□□ -0.82
TUBB3-213ENST00000557262 PPP1R17O96001 155 aa9.93□□□□□ -0.82
TUBB3-213ENST00000557262 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
TUBB3-213ENST00000557262 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
TUBB3-213ENST00000557262 LINC01600Q96MT4 127 aa9.93□□□□□ -0.82
TUBB3-213ENST00000557262 V9GYV3 84 aa9.93□□□□□ -0.82
TUBB3-213ENST00000557262 C1orf196B1AJZ1 125 aa9.92□□□□□ -0.82
TUBB3-213ENST00000557262 FCER1GP30273 86 aa9.92□□□□□ -0.82
TUBB3-213ENST00000557262 SMAGPQ0VAQ4 97 aa9.92□□□□□ -0.82
TUBB3-213ENST00000557262 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
TUBB3-213ENST00000557262 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
TUBB3-213ENST00000557262 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
TUBB3-213ENST00000557262 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
TUBB3-213ENST00000557262 MALP21145 153 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 CAMPP49913 170 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 SUMO2P61956 95 aaKnown RBP9.9□□□□□ -0.82
TUBB3-213ENST00000557262 TMEM241Q24JQ0 296 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 NRACQ8N912 160 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 ISOC2Q96AB3 205 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.82
TUBB3-213ENST00000557262 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
TUBB3-213ENST00000557262 COX7A2LO14548 114 aa9.89□□□□□ -0.83
TUBB3-213ENST00000557262 NAT8BQ9UHF3 227 aa9.89□□□□□ -0.83
TUBB3-213ENST00000557262 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
TUBB3-213ENST00000557262 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
TUBB3-213ENST00000557262 PTTG1IPP53801 180 aa9.88□□□□□ -0.83
TUBB3-213ENST00000557262 FAM74A3Q4VXF1 159 aa9.88□□□□□ -0.83
TUBB3-213ENST00000557262 FAM104BQ5XKR9 115 aa9.88□□□□□ -0.83
TUBB3-213ENST00000557262 Q6ZRP5 223 aa9.88□□□□□ -0.83
TUBB3-213ENST00000557262 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
TUBB3-213ENST00000557262 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
TUBB3-213ENST00000557262 RPL23P62829 140 aaKnown RBP9.87□□□□□ -0.83
TUBB3-213ENST00000557262 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
TUBB3-213ENST00000557262 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
TUBB3-213ENST00000557262 MRPL51Q4U2R6 128 aaKnown RBP9.87□□□□□ -0.83
TUBB3-213ENST00000557262 RNASE13Q5GAN3 156 aaKnown RBP9.87□□□□□ -0.83
TUBB3-213ENST00000557262 REG3GQ6UW15 175 aa9.87□□□□□ -0.83
TUBB3-213ENST00000557262 TMEM18Q96B42 140 aa9.87□□□□□ -0.83
TUBB3-213ENST00000557262 TIMM21Q9BVV7 248 aa9.87□□□□□ -0.83
TUBB3-213ENST00000557262 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
TUBB3-213ENST00000557262 C2orf48Q96LS8 159 aa9.86□□□□□ -0.83
TUBB3-213ENST00000557262 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
TUBB3-213ENST00000557262 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
TUBB3-213ENST00000557262 TRBV24-1A0A075B6N3 115 aa9.85□□□□□ -0.83
TUBB3-213ENST00000557262 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
TUBB3-213ENST00000557262 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
TUBB3-213ENST00000557262 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
TUBB3-213ENST00000557262 A0A1B0GW15 77 aa9.84□□□□□ -0.83
TUBB3-213ENST00000557262 APOMO95445 188 aa9.84□□□□□ -0.83
TUBB3-213ENST00000557262 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
TUBB3-213ENST00000557262 LRP2P98164 4655 aa9.84□□□□□ -0.83
TUBB3-213ENST00000557262 ADIRFQ15847 76 aa9.84□□□□□ -0.83
TUBB3-213ENST00000557262 NAT8Q9UHE5 227 aa9.84□□□□□ -0.83
TUBB3-213ENST00000557262 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
TUBB3-213ENST00000557262 TCAPO15273 167 aa9.83□□□□□ -0.84
TUBB3-213ENST00000557262 CKS2P33552 79 aa9.83□□□□□ -0.84
TUBB3-213ENST00000557262 Q6ZUT4 128 aa9.83□□□□□ -0.84
TUBB3-213ENST00000557262 C9JQL5 133 aa9.82□□□□□ -0.84
TUBB3-213ENST00000557262 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.81□□□□□ -0.84
TUBB3-213ENST00000557262 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
TUBB3-213ENST00000557262 ODF1Q14990 250 aa9.81□□□□□ -0.84
TUBB3-213ENST00000557262 RNF151Q2KHN1 245 aa9.81□□□□□ -0.84
TUBB3-213ENST00000557262 RPL39P62891 51 aaKnown RBP9.8□□□□□ -0.84
TUBB3-213ENST00000557262 PEA15Q15121 130 aa9.8□□□□□ -0.84
TUBB3-213ENST00000557262 C9orf116Q5BN46 136 aaPredicted RBP9.8□□□□□ -0.84
TUBB3-213ENST00000557262 OR10D4PQ8NGN7 298 aa9.8□□□□□ -0.84
TUBB3-213ENST00000557262 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
TUBB3-213ENST00000557262 F8WDY8 70 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 S100A8P05109 93 aa9.79□□□□□ -0.84
TUBB3-213ENST00000557262 SRSF3P84103 164 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms