RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 HBBP68871 147 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 SMAGPQ0VAQ4 97 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 FAM104BQ5XKR9 115 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 MRPL54Q6P161 138 aaKnown RBP7.77□□□□□ -1.17
SYNE2-226ENST00000557084 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 Q6ZSA8 131 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
SYNE2-226ENST00000557084 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-226ENST00000557084 C7orf77A4D0Y5 90 aa7.76□□□□□ -1.17
SYNE2-226ENST00000557084 POLR2KP53803 58 aaKnown RBP7.76□□□□□ -1.17
SYNE2-226ENST00000557084 SUMO2P61956 95 aaKnown RBP7.76□□□□□ -1.17
SYNE2-226ENST00000557084 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
SYNE2-226ENST00000557084 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-226ENST00000557084 DNAH8Q96JB1 4490 aa7.75□□□□□ -1.17
SYNE2-226ENST00000557084 LINC00862A6NCI5 91 aa7.75□□□□□ -1.17
SYNE2-226ENST00000557084 MT-ND4LP03901 98 aa7.75□□□□□ -1.17
SYNE2-226ENST00000557084 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
SYNE2-226ENST00000557084 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-226ENST00000557084 MRPL51Q4U2R6 128 aaKnown RBP7.75□□□□□ -1.17
SYNE2-226ENST00000557084 CHCHD10Q8WYQ3 142 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-226ENST00000557084 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 ESDP10768 282 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 XCL1P47992 114 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 SCXQ7RTU7 201 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 NRACQ8N912 160 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 C9orf163Q8N9P6 203 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
SYNE2-226ENST00000557084 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-226ENST00000557084 D6R8Y8 96 aa7.73□□□□□ -1.17
SYNE2-226ENST00000557084 TCAPO15273 167 aa7.73□□□□□ -1.17
SYNE2-226ENST00000557084 SS18Q15532 418 aa7.73□□□□□ -1.17
SYNE2-226ENST00000557084 ATP5L2Q7Z4Y8 100 aa7.73□□□□□ -1.17
SYNE2-226ENST00000557084 MRPL52Q86TS9 123 aaKnown RBP7.73□□□□□ -1.17
SYNE2-226ENST00000557084 DPH3Q96FX2 82 aa7.73□□□□□ -1.17
SYNE2-226ENST00000557084 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 TNFRSF6BO95407 300 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 PPBPP02775 128 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
SYNE2-226ENST00000557084 ZNF664Q8N3J9 261 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 CIRBP-AS1Q8TBR5 109 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 ANAPC16Q96DE5 110 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
SYNE2-226ENST00000557084 TRBV24-1A0A075B6N3 115 aa7.71□□□□□ -1.18
SYNE2-226ENST00000557084 LINC00959A0A1B0GUT2 108 aa7.71□□□□□ -1.18
SYNE2-226ENST00000557084 A0A1B0GXF2 115 aa7.71□□□□□ -1.18
SYNE2-226ENST00000557084 CCL25O15444 150 aa7.71□□□□□ -1.18
SYNE2-226ENST00000557084 HIGD2BQ4VC39 106 aa7.71□□□□□ -1.18
SYNE2-226ENST00000557084 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
SYNE2-226ENST00000557084 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
SYNE2-226ENST00000557084 RAB5AP20339 215 aa7.7□□□□□ -1.18
SYNE2-226ENST00000557084 UQCC3Q6UW78 93 aa7.7□□□□□ -1.18
SYNE2-226ENST00000557084 COMMD7Q86VX2 200 aa7.7□□□□□ -1.18
SYNE2-226ENST00000557084 ORMDL3Q8N138 153 aa7.7□□□□□ -1.18
SYNE2-226ENST00000557084 SMIM2Q9BVW6 85 aa7.7□□□□□ -1.18
SYNE2-226ENST00000557084 C1orf196B1AJZ1 125 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 PHOX2AO14813 284 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 RPL32P62910 135 aaKnown RBP7.69□□□□□ -1.18
SYNE2-226ENST00000557084 FOXI1Q12951 378 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 SDIM1Q6ZPB5 146 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 TMEM136Q6ZRR5 245 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
SYNE2-226ENST00000557084 TRAV13-1A0A0B4J241 112 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 NPYP01303 97 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 ADCYAP1P18509 176 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 MALP21145 153 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 RNASE13Q5GAN3 156 aaKnown RBP7.68□□□□□ -1.18
SYNE2-226ENST00000557084 CD164L2Q6UWJ8 174 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 UBE2D4Q9Y2X8 147 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
SYNE2-226ENST00000557084 HERC1Q15751 4861 aa7.68□□□□□ -1.18
SYNE2-226ENST00000557084 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-226ENST00000557084 IGHV1-58A0A0C4DH39 117 aa7.67□□□□□ -1.18
SYNE2-226ENST00000557084 TMEM218A2RU14 115 aa7.67□□□□□ -1.18
SYNE2-226ENST00000557084 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
SYNE2-226ENST00000557084 TIMM21Q9BVV7 248 aa7.67□□□□□ -1.18
SYNE2-226ENST00000557084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-226ENST00000557084 COX7A2LO14548 114 aa7.66□□□□□ -1.18
SYNE2-226ENST00000557084 SLPIP03973 132 aa7.66□□□□□ -1.18
SYNE2-226ENST00000557084 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
SYNE2-226ENST00000557084 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.18
SYNE2-226ENST00000557084 Q6ZUT4 128 aa7.65□□□□□ -1.18
SYNE2-226ENST00000557084 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.18
SYNE2-226ENST00000557084 SPANXA1Q9NS26 97 aa7.65□□□□□ -1.18
SYNE2-226ENST00000557084 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.18
SYNE2-226ENST00000557084 LAMTOR2Q9Y2Q5 125 aa7.65□□□□□ -1.18
SYNE2-226ENST00000557084 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
SYNE2-226ENST00000557084 COX6A2Q02221 97 aa7.64□□□□□ -1.19
SYNE2-226ENST00000557084 CTDSP1Q9GZU7 261 aa7.64□□□□□ -1.19
SYNE2-226ENST00000557084 IGKV2-24A0A0C4DH68 120 aa7.63□□□□□ -1.19
SYNE2-226ENST00000557084 PANO1I0J062 215 aa7.63□□□□□ -1.19
SYNE2-226ENST00000557084 APOMO95445 188 aa7.63□□□□□ -1.19
SYNE2-226ENST00000557084 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
SYNE2-226ENST00000557084 IFI27P40305 119 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-226ENST00000557084 C10orf91Q5T1B1 145 aa7.63□□□□□ -1.19
SYNE2-226ENST00000557084 XP32Q5T750 250 aa7.63□□□□□ -1.19
SYNE2-226ENST00000557084 LINC00526Q96FQ7 95 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms