RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-245ENST00000556958 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 GVQW2A0A096LPI5 108 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-245ENST00000556958 LOC107984640A0A0U1RRK4 108 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 FGF6P10767 208 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
ATXN3-245ENST00000556958 C9orf116Q5BN46 136 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-245ENST00000556958 PRNTQ86SH4 94 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 CARD19Q96LW7 228 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 JPT2Q9H910 190 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 CYTL1Q9NRR1 136 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 TMEM167BQ9NRX6 74 aa3.32□□□□□ -1.88
ATXN3-245ENST00000556958 TRAV34A0A0B4J273 112 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 A0A1B0GUV1 79 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 MAP1LC3B2A6NCE7 125 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 F6UZH7 168 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 VCYO14598 125 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 BCL2L11O43521 198 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 STAG3L2P0CL84 134 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 STAG3L3P0CL85 134 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 TPT1P13693 172 aaKnown RBP3.31□□□□□ -1.88
ATXN3-245ENST00000556958 FHITP49789 147 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-245ENST00000556958 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 PHF5AQ7RTV0 110 aaKnown RBP3.31□□□□□ -1.88
ATXN3-245ENST00000556958 DERL1Q9BUN8 251 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 MAP1LC3BQ9GZQ8 125 aa3.31□□□□□ -1.88
ATXN3-245ENST00000556958 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 TSHBP01222 138 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 UBE2G1P62253 170 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 C20orf203Q8NBC4 194 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 NEXN-AS1Q8NBZ9 246 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 ISOC2Q96AB3 205 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 SFRP2Q96HF1 295 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 EPDR1Q9UM22 224 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
ATXN3-245ENST00000556958 TRBV6-1A0A0K0K1D8 114 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 PRSS47A8MTI9 375 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 UMAD1C9J7I0 102 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 TCRAP04437 139 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 RAB4BP61018 213 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 SSTP61278 116 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 IQCJQ1A5X6 159 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 PAPPA-AS1Q5QFB9 102 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-245ENST00000556958 C5orf17Q8NAS9 161 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 TVP23CQ96ET8 276 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 IL36BQ9NZH7 164 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 GNG13Q9P2W3 67 aa3.29□□□□□ -1.88
ATXN3-245ENST00000556958 IGLV4-60A0A075B6I1 120 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 TMSB15BA0A087X1C1 80 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 IGHV1-58A0A0C4DH39 117 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 A0A1W2PRE2 83 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 FAM74A7A6NL05 159 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 PEX7O00628 323 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 ZNF861PO60384 105 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 GCGP01275 180 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 AKR1C3P42330 323 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 CEBPGP53567 150 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 CCL20P78556 96 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 SAPCD1Q5SSQ6 148 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 Q8N9P0 234 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-245ENST00000556958 LINC00304Q8N9R0 145 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 MBD3L1Q8WWY6 194 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-245ENST00000556958 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
ATXN3-245ENST00000556958 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 GRIFINA4D1Z8 144 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 M0R036 132 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 IFNA1P01562 189 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 CAMPP49913 170 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-245ENST00000556958 UBE2BP63146 152 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-245ENST00000556958 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 TMEM243Q9BU79 118 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
ATXN3-245ENST00000556958 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 IGLV5-37A0A075B6J1 123 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 A0A087X002 238 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 B4DEV8 164 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms