RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CXCL1P09341 107 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 SULT1A2P50226 295 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 AKR1C8PQ5T2L2 129 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 INO80EQ8NBZ0 244 aaPredicted RBP5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 AP1S3Q96PC3 154 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 MAP1LC3BQ9GZQ8 125 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 SMDT1Q9H4I9 107 aa5.62□□□□□ -1.51
HNRNPC-227ENST00000556897 A0A096LNI7 61 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 BORCS7-ASMTA0A0B4J1R7 106 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 IGKV3OR2-268A0A0C4DH90 116 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 HSBP1L1C9JCN9 74 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 M0R143 59 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 FHITP49789 147 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 MUC2Q02817 5179 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
HNRNPC-227ENST00000556897 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 H7C1H1 209 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 UBE2L6O14933 153 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 PPP1R2P9O14990 202 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 SRSF9Q13242 221 aaKnown RBP eCLIP5.6□□□□□ -1.514e-16■■■□□ 16.3
HNRNPC-227ENST00000556897 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 YPEL4Q96NS1 127 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 MLST8Q9BVC4 326 aa5.6□□□□□ -1.51
HNRNPC-227ENST00000556897 C7orf77A4D0Y5 90 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 IFITM10A6NMD0 228 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 PAGE4O60829 102 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 BAGE2Q86Y30 109 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 HIST3H2BBQ8N257 126 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 NUDT10Q8NFP7 164 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 OR10D4PQ8NGN7 298 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 NUDT11Q96G61 164 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 TPPP3Q9BW30 176 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 RPS10P5Q9NQ39 176 aa5.59□□□□□ -1.51
HNRNPC-227ENST00000556897 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 AMTP48728 403 aa5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 RASL11AQ6T310 242 aa5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 Q6ZRP5 223 aa5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 CHCHD10Q8WYQ3 142 aaPredicted RBP5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 PGLYRP4Q96LB8 373 aa5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 LINC00474Q9P2X8 69 aa5.58□□□□□ -1.52
HNRNPC-227ENST00000556897 ZNF25P17030 456 aaPredicted RBP5.57□□□□□ -1.52
HNRNPC-227ENST00000556897 A0A1B0GV50 99 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 NDUFA6P56556 154 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 COA6Q5JTJ3 125 aaKnown RBP5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 SMIM15Q7Z3B0 74 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 FER1L6-AS1Q8NA97 138 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 LINC00526Q96FQ7 95 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 CYTL1Q9NRR1 136 aa5.56□□□□□ -1.52
HNRNPC-227ENST00000556897 FAM231BA6NCW3 169 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 PPBPP02775 128 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 RPS20P60866 119 aaKnown RBP5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 CACNG7P62955 275 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 FOXI1Q12951 378 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 AMMECR1LQ6DCA0 310 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 OR2D3Q8NGH3 330 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 SNHG12Q9BXW3 62 aa5.55□□□□□ -1.52
HNRNPC-227ENST00000556897 NTF3P20783 257 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 G0S2P27469 103 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 XCL1P47992 114 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 TMEM241Q24JQ0 296 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 RNASEKQ6P5S7 137 aaKnown RBP5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 PACRGQ96M98 296 aaPredicted RBP5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 PRO1933Q9H354 126 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 PKIGQ9Y2B9 76 aa5.54□□□□□ -1.52
HNRNPC-227ENST00000556897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 IGKV2-29A2NJV5 120 aaPredicted RBP5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 TRGC1P0CF51 173 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 FGF6P10767 208 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 FAM213BQ8TBF2 198 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 HIST1H2BLQ99880 126 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 TMEM242Q9NWH2 141 aa5.53□□□□□ -1.52
HNRNPC-227ENST00000556897 TRAV26-2A0A0B4J265 109 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 F2Z2F3 143 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 CENPWQ5EE01 88 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 LYZL1Q6UWQ5 148 aa5.52□□□□□ -1.53
HNRNPC-227ENST00000556897 MBD3L1Q8WWY6 194 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms