RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 SLPIP03973 132 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 CHTF8P0CG12 524 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 ZNF25P17030 456 aaPredicted RBP4.59□□□□□ -1.67
PCNX1-213ENST00000556846 FCER1GP30273 86 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 XCL1P47992 114 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
PCNX1-213ENST00000556846 RIGQ13278 110 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 SS18Q15532 418 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 TMEM241Q24JQ0 296 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 SERTAD4-AS1Q5TG53 156 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 LINC01551Q86U37 167 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 LYPD6BQ8NI32 183 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 MRAP2Q96G30 205 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 FAM210AQ96ND0 272 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 TMEM191AQ9H0A3 160 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 OSTCQ9NRP0 149 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 TMEM242Q9NWH2 141 aa4.59□□□□□ -1.67
PCNX1-213ENST00000556846 A0A087WYN8 130 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 TRBV6-5A0A0K0K1A5 114 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 FAM231BA6NCW3 169 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 VCYO14598 125 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 GAS8-AS1O95177 125 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 SRP19P09132 144 aaKnown RBP4.58□□□□□ -1.68
PCNX1-213ENST00000556846 RAB4AP20338 218 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 COX6A2Q02221 97 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 MAJINQ3KP22 176 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 AMN1Q8IY45 258 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 C7orf33Q8WU49 177 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 RNF185Q96GF1 192 aa4.58□□□□□ -1.68
PCNX1-213ENST00000556846 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
PCNX1-213ENST00000556846 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
PCNX1-213ENST00000556846 IGKV2-24A0A0C4DH68 120 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 LINC00959A0A1B0GUT2 108 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 CCL25O15444 150 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 NDUFS6O75380 124 aaKnown RBP4.57□□□□□ -1.68
PCNX1-213ENST00000556846 PPP1R17O96001 155 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 TSHBP01222 138 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 MALP21145 153 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 FAM74A3Q4VXF1 159 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 ZNF664Q8N3J9 261 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 C15orf56Q8N910 161 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 PRSS3P2Q8NHM4 247 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 KIR2DL4Q99706 377 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 NAT8BQ9UHF3 227 aa4.57□□□□□ -1.68
PCNX1-213ENST00000556846 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
PCNX1-213ENST00000556846 IGHV1-58A0A0C4DH39 117 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 C7orf77A4D0Y5 90 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 ZNF561-AS1K7EIQ3 104 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 ESDP10768 282 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 CAMPP49913 170 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 HNRNPA3P51991 378 aaKnown RBP4.56□□□□□ -1.68
PCNX1-213ENST00000556846 POLR2KP53803 58 aaKnown RBP4.56□□□□□ -1.68
PCNX1-213ENST00000556846 SMAGPQ0VAQ4 97 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 FOXI1Q12951 378 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 CIRBPQ14011 172 aaKnown RBP4.56□□□□□ -1.68
PCNX1-213ENST00000556846 ADIRFQ15847 76 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 NUP35Q8NFH5 326 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 V9GYV3 84 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 FAT1Q14517 4588 aa4.56□□□□□ -1.68
PCNX1-213ENST00000556846 TRBV27A0A0K0K1C4 114 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 SUMO2P61956 95 aaKnown RBP4.55□□□□□ -1.68
PCNX1-213ENST00000556846 RPL23P62829 140 aaKnown RBP4.55□□□□□ -1.68
PCNX1-213ENST00000556846 PEA15Q15121 130 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 Q6ZRU5 148 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 MRPL52Q86TS9 123 aaKnown RBP4.55□□□□□ -1.68
PCNX1-213ENST00000556846 STPG4Q8N801 248 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 ISOC2Q96AB3 205 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 TMEM18Q96B42 140 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 LINC00526Q96FQ7 95 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 PLAC8Q9NZF1 115 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 LINC00474Q9P2X8 69 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 NAT8Q9UHE5 227 aa4.55□□□□□ -1.68
PCNX1-213ENST00000556846 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 C1orf196B1AJZ1 125 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 COX7A2LO14548 114 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 PHOX2AO14813 284 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 PPP1R2P9O14990 202 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 CKS2P33552 79 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 CARD19Q96LW7 228 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 PLA2G2DQ9UNK4 145 aa4.54□□□□□ -1.68
PCNX1-213ENST00000556846 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
PCNX1-213ENST00000556846 A0A096LNI7 61 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 A0A1B0GVG6 124 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 A0A1B0GW15 77 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 LINC00862A6NCI5 91 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 MRPL51Q4U2R6 128 aaKnown RBP4.53□□□□□ -1.68
PCNX1-213ENST00000556846 RNASE13Q5GAN3 156 aaKnown RBP4.53□□□□□ -1.68
PCNX1-213ENST00000556846 FAM104BQ5XKR9 115 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 NRACQ8N912 160 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
PCNX1-213ENST00000556846 IGLV4-69A0A075B6H9 119 aa4.52□□□□□ -1.69
PCNX1-213ENST00000556846 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
PCNX1-213ENST00000556846 C9JQL5 133 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms