RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 H7C423 109 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 K7EQD1 137 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 SIVA1O15304 175 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 IGLL1P15814 213 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 HERVK_113P61574 105 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 PMVKQ15126 192 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 SLC25A34Q6PIV7 304 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 Q8N976 141 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 PRO1933Q9H354 126 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 MRPL16Q9NX20 251 aaKnown RBP4.29□□□□□ -1.72
TMEM260-212ENST00000556810 TP53TG1Q9Y2A0 90 aa4.29□□□□□ -1.72
TMEM260-212ENST00000556810 M0R143 59 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 GIG44P09565 113 aaPredicted RBP4.28□□□□□ -1.72
TMEM260-212ENST00000556810 IGLC3P0DOY3 106 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
TMEM260-212ENST00000556810 SEC11AP67812 179 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 SH2D6Q7Z4S9 175 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 C20orf203Q8NBC4 194 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 C2orf88Q9BSF0 95 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 GTSF1LQ9H1H1 148 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 VCX2Q9H322 139 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
TMEM260-212ENST00000556810 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
TMEM260-212ENST00000556810 CHTOPQ9Y3Y2 248 aaKnown RBP4.28□□□□□ -1.72
TMEM260-212ENST00000556810 NACAE9PAV3 2078 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 IGHV3-73A0A0B4J1V6 119 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 UBE2L6O14933 153 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 DLEU1O43261 78 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE7O76087 117 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 PRB2P02812 416 aaPredicted RBP4.27□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE12FP0CL80 117 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE12GP0CL81 117 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE12IP0CL82 117 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 COX8AP10176 69 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 EGFEM1PQ0D2K5 195 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
TMEM260-212ENST00000556810 Q6ZTI0 123 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 LINC00173Q6ZV60 143 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 ATOH7Q8N100 152 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 OR11H2Q8NH07 326 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 ZNRF2Q8NHG8 242 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 TMEM101Q96IK0 257 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
TMEM260-212ENST00000556810 TRBV25-1A0A075B6N4 114 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 IGIPA6NJ69 53 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 G3V4G9 280 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 TSHBP01222 138 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 ZNF25P17030 456 aaPredicted RBP4.26□□□□□ -1.73
TMEM260-212ENST00000556810 BAALCQ8WXS3 180 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 PRO0255Q9UI72 69 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 HHLA3Q9XRX5 114 aa4.26□□□□□ -1.73
TMEM260-212ENST00000556810 CSDC2Q9Y534 153 aaKnown RBP4.26□□□□□ -1.73
TMEM260-212ENST00000556810 KMT2CQ8NEZ4 4911 aaKnown RBP4.25□□□□□ -1.73
TMEM260-212ENST00000556810 hDV102S1A0JD36 115 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 ATP5G1P05496 136 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 DAD1P61803 113 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 MRPS36P82909 103 aaKnown RBP4.25□□□□□ -1.73
TMEM260-212ENST00000556810 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 AMMECR1LQ6DCA0 310 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 LINC00612Q8N6U2 182 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 SLC25A29Q8N8R3 303 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 C14orf144Q96I85 54 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 CST9LQ9H4G1 147 aa4.25□□□□□ -1.73
TMEM260-212ENST00000556810 MRPL35Q9NZE8 188 aaKnown RBP4.25□□□□□ -1.73
TMEM260-212ENST00000556810 PLAC8L1A1L4L8 177 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 H3BRM9 83 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 CCL25O15444 150 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 PRM2P04554 102 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 DEFB130BP0DP73 79 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 DEFB130AP0DP74 79 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 NMUP48645 174 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 EMP1P54849 157 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 UBE2D3P61077 147 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 UBE2D2P62837 147 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE2BQ13066 116 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 UBE2V1Q13404 147 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 DEFB135Q30KP9 77 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE2EQ4V326 116 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE2AQ6NT46 116 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 Q6ZTC4 211 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 TMEM243Q9BU79 118 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 GAGE2DQ9UEU5 116 aa4.24□□□□□ -1.73
TMEM260-212ENST00000556810 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 TENM3Q9P273 2699 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 TRAV26-1A0A087WT03 109 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 E9PLD3 99 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 P0DMU3 169 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 FAM231AP0DMU4 169 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 FAM231CP0DMU5 169 aa4.23□□□□□ -1.73
TMEM260-212ENST00000556810 RPL39P62891 51 aaKnown RBP4.23□□□□□ -1.73
TMEM260-212ENST00000556810 CTAG1AP78358 180 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms