RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 GAS8-AS1O95177 125 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 TSHBP01222 138 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 S100A8P05109 93 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 FCER1GP30273 86 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
XRCC3-216ENST00000556682 SUMO2P61956 95 aaKnown RBP6.96□□□□□ -1.3
XRCC3-216ENST00000556682 SDIM1Q6ZPB5 146 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 KIR2DL4Q99706 377 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
XRCC3-216ENST00000556682 LINC00862A6NCI5 91 aa6.95□□□□□ -1.3
XRCC3-216ENST00000556682 CAMPP49913 170 aa6.95□□□□□ -1.3
XRCC3-216ENST00000556682 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
XRCC3-216ENST00000556682 SS18Q15532 418 aa6.95□□□□□ -1.3
XRCC3-216ENST00000556682 FAM104BQ5XKR9 115 aa6.95□□□□□ -1.3
XRCC3-216ENST00000556682 F8W036 122 aa6.94□□□□□ -1.3
XRCC3-216ENST00000556682 SMKR1H3BMG3 65 aa6.94□□□□□ -1.3
XRCC3-216ENST00000556682 TCAPO15273 167 aa6.94□□□□□ -1.3
XRCC3-216ENST00000556682 CKS2P33552 79 aa6.94□□□□□ -1.3
XRCC3-216ENST00000556682 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
XRCC3-216ENST00000556682 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
XRCC3-216ENST00000556682 C20orf78Q9BR46 151 aa6.94□□□□□ -1.3
XRCC3-216ENST00000556682 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 CCL25O15444 150 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 XCL1P47992 114 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 RAB14P61106 215 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 MRPL51Q4U2R6 128 aaKnown RBP6.93□□□□□ -1.3
XRCC3-216ENST00000556682 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 NRACQ8N912 160 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
XRCC3-216ENST00000556682 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
XRCC3-216ENST00000556682 SLPIP03973 132 aa6.92□□□□□ -1.3
XRCC3-216ENST00000556682 RPL37AP61513 92 aaKnown RBP6.92□□□□□ -1.3
XRCC3-216ENST00000556682 HBBP68871 147 aa6.92□□□□□ -1.3
XRCC3-216ENST00000556682 FOXI1Q12951 378 aa6.92□□□□□ -1.3
XRCC3-216ENST00000556682 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
XRCC3-216ENST00000556682 CD164L2Q6UWJ8 174 aa6.92□□□□□ -1.3
XRCC3-216ENST00000556682 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
XRCC3-216ENST00000556682 SRRM2Q9UQ35 2752 aaKnown RBP6.92□□□□□ -1.3
XRCC3-216ENST00000556682 TRBV24-1A0A075B6N3 115 aa6.91□□□□□ -1.3
XRCC3-216ENST00000556682 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
XRCC3-216ENST00000556682 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
XRCC3-216ENST00000556682 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
XRCC3-216ENST00000556682 C1orf196B1AJZ1 125 aa6.91□□□□□ -1.3
XRCC3-216ENST00000556682 PPBPP02775 128 aa6.91□□□□□ -1.3
XRCC3-216ENST00000556682 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
XRCC3-216ENST00000556682 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
XRCC3-216ENST00000556682 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
XRCC3-216ENST00000556682 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
XRCC3-216ENST00000556682 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
XRCC3-216ENST00000556682 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
XRCC3-216ENST00000556682 MALP21145 153 aa6.9□□□□□ -1.3
XRCC3-216ENST00000556682 COX6A2Q02221 97 aa6.9□□□□□ -1.3
XRCC3-216ENST00000556682 PNRC1Q12796 327 aaPredicted RBP6.9□□□□□ -1.3
XRCC3-216ENST00000556682 ATP5L2Q7Z4Y8 100 aa6.9□□□□□ -1.3
XRCC3-216ENST00000556682 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.3
XRCC3-216ENST00000556682 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.31
XRCC3-216ENST00000556682 D6R8Y8 96 aa6.89□□□□□ -1.31
XRCC3-216ENST00000556682 PANO1I0J062 215 aa6.89□□□□□ -1.31
XRCC3-216ENST00000556682 PHOX2AO14813 284 aa6.89□□□□□ -1.31
XRCC3-216ENST00000556682 TIMM21Q9BVV7 248 aa6.89□□□□□ -1.31
XRCC3-216ENST00000556682 A0A087WYN8 130 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 A0A1B0GXF2 115 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 OXTP01178 125 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 MT-ND4LP03901 98 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
XRCC3-216ENST00000556682 ORMDL3Q8N138 153 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 SPACA4Q8TDM5 124 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 SMIM2Q9BVW6 85 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
XRCC3-216ENST00000556682 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
XRCC3-216ENST00000556682 TRAV13-1A0A0B4J241 112 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 COX7A2LO14548 114 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 RAB5AP20339 215 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 TMEM136Q6ZRR5 245 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 CARD19Q96LW7 228 aa6.87□□□□□ -1.31
XRCC3-216ENST00000556682 IGKV2-24A0A0C4DH68 120 aa6.86□□□□□ -1.31
XRCC3-216ENST00000556682 APOMO95445 188 aa6.86□□□□□ -1.31
XRCC3-216ENST00000556682 NPYP01303 97 aa6.86□□□□□ -1.31
XRCC3-216ENST00000556682 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
XRCC3-216ENST00000556682 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
XRCC3-216ENST00000556682 PLAC8Q9NZF1 115 aa6.86□□□□□ -1.31
XRCC3-216ENST00000556682 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
XRCC3-216ENST00000556682 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
XRCC3-216ENST00000556682 PRELID3AQ96N28 172 aa6.85□□□□□ -1.31
XRCC3-216ENST00000556682 LAMTOR2Q9Y2Q5 125 aa6.85□□□□□ -1.31
XRCC3-216ENST00000556682 IFI27P40305 119 aaPredicted RBP6.84□□□□□ -1.31
XRCC3-216ENST00000556682 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
XRCC3-216ENST00000556682 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
XRCC3-216ENST00000556682 Q6ZUT4 128 aa6.84□□□□□ -1.31
XRCC3-216ENST00000556682 STPG4Q8N801 248 aa6.84□□□□□ -1.31
XRCC3-216ENST00000556682 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
XRCC3-216ENST00000556682 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
XRCC3-216ENST00000556682 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms