RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PRSS3P2Q8NHM4 247 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 SPACA4Q8TDM5 124 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 RNF185Q96GF1 192 aa6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
SPTLC2-205ENST00000556607 ESDP10768 282 aa6.72□□□□□ -1.33
SPTLC2-205ENST00000556607 FOXI1Q12951 378 aa6.72□□□□□ -1.33
SPTLC2-205ENST00000556607 ADIRFQ15847 76 aa6.72□□□□□ -1.33
SPTLC2-205ENST00000556607 STPG4Q8N801 248 aa6.72□□□□□ -1.33
SPTLC2-205ENST00000556607 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
SPTLC2-205ENST00000556607 V9GYV3 84 aa6.72□□□□□ -1.33
SPTLC2-205ENST00000556607 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 VCYO14598 125 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 PHOX2AO14813 284 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 PPP1R17O96001 155 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 MALP21145 153 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 POLR2KP53803 58 aaKnown RBP6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 RPL23P62829 140 aaKnown RBP6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 FAM74A3Q4VXF1 159 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 ZNF664Q8N3J9 261 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 ISOC2Q96AB3 205 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 LINC00526Q96FQ7 95 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 KIR2DL4Q99706 377 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 CDC42SE2Q9NRR3 84 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 NAT8BQ9UHF3 227 aa6.71□□□□□ -1.34
SPTLC2-205ENST00000556607 CAMPP49913 170 aa6.7□□□□□ -1.34
SPTLC2-205ENST00000556607 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
SPTLC2-205ENST00000556607 PEA15Q15121 130 aa6.7□□□□□ -1.34
SPTLC2-205ENST00000556607 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
SPTLC2-205ENST00000556607 A0A096LNI7 61 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 A0A1B0GVG6 124 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 RNASE13Q5GAN3 156 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 CD164L2Q6UWJ8 174 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 Q6ZRU5 148 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 MRPL52Q86TS9 123 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 PLAC8Q9NZF1 115 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
SPTLC2-205ENST00000556607 TRAV13-1A0A0B4J241 112 aa6.68□□□□□ -1.34
SPTLC2-205ENST00000556607 C1orf196B1AJZ1 125 aa6.68□□□□□ -1.34
SPTLC2-205ENST00000556607 CKS2P33552 79 aa6.68□□□□□ -1.34
SPTLC2-205ENST00000556607 LINC00474Q9P2X8 69 aa6.68□□□□□ -1.34
SPTLC2-205ENST00000556607 COX7A2LO14548 114 aa6.67□□□□□ -1.34
SPTLC2-205ENST00000556607 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
SPTLC2-205ENST00000556607 MRPL51Q4U2R6 128 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-205ENST00000556607 FAM104BQ5XKR9 115 aa6.67□□□□□ -1.34
SPTLC2-205ENST00000556607 NRACQ8N912 160 aa6.67□□□□□ -1.34
SPTLC2-205ENST00000556607 UBE2D4Q9Y2X8 147 aa6.67□□□□□ -1.34
SPTLC2-205ENST00000556607 IGLV4-69A0A075B6H9 119 aa6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 SMIM27A0A1W2PRY6 76 aa6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 C9JQL5 133 aa6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 CAMK2N2Q96S95 79 aa6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
SPTLC2-205ENST00000556607 A0A1B0GW15 77 aa6.65□□□□□ -1.34
SPTLC2-205ENST00000556607 F8W036 122 aa6.65□□□□□ -1.34
SPTLC2-205ENST00000556607 APOMO95445 188 aa6.65□□□□□ -1.34
SPTLC2-205ENST00000556607 S100A8P05109 93 aa6.65□□□□□ -1.34
SPTLC2-205ENST00000556607 C5orf38Q86SI9 138 aa6.65□□□□□ -1.34
SPTLC2-205ENST00000556607 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
SPTLC2-205ENST00000556607 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 LOC107984640A0A0U1RRK4 108 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 D6R8Y8 96 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 TCAPO15273 167 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 TNFRSF6BO95407 300 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 HBBP68871 147 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 Q6ZUT4 128 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 C20orf78Q9BR46 151 aa6.64□□□□□ -1.35
SPTLC2-205ENST00000556607 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
SPTLC2-205ENST00000556607 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
SPTLC2-205ENST00000556607 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
SPTLC2-205ENST00000556607 PKHD1L1Q86WI1 4243 aa6.63□□□□□ -1.35
SPTLC2-205ENST00000556607 SMDT1Q9H4I9 107 aa6.63□□□□□ -1.35
SPTLC2-205ENST00000556607 TRBV24-1A0A075B6N3 115 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 NPYP01303 97 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 RAB5AP20339 215 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
SPTLC2-205ENST00000556607 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
SPTLC2-205ENST00000556607 Q6ZRP5 223 aa6.61□□□□□ -1.35
SPTLC2-205ENST00000556607 OPRPNQ99935 248 aaPredicted RBP6.61□□□□□ -1.35
SPTLC2-205ENST00000556607 A0A0J9YXV3 536 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 PPBPP02775 128 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 RPL32P62910 135 aaKnown RBP6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 ORMDL3Q8N138 153 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 ORAOV1Q8WV07 137 aa6.6□□□□□ -1.35
SPTLC2-205ENST00000556607 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms