RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 LINC00167Q96N53 147 aa4.21□□□□□ -1.74
TDP1-215ENST00000556498 IGHV3-43A0A0B4J1X8 118 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 IGHV4-28A0A0C4DH34 117 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 WFDC9Q8NEX5 89 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 FLVCR1-AS1Q8TAF5 88 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 SMIM14Q96QK8 99 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 DEC1Q9P2X7 70 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 CCL26Q9Y258 94 aa4.2□□□□□ -1.74
TDP1-215ENST00000556498 IGHV3-74A0A0B4J1X5 117 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 INAFM1C9JVW0 142 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 IGHV4-30-4P0DP06 118 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 COX7A1P24310 79 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 HAMPP81172 84 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 SPINK9Q5DT21 86 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 MIR7-3HGQ8N6C7 128 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 LINC00308Q8TCZ7 52 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 ZCCHC13Q8WW36 166 aaKnown RBP4.19□□□□□ -1.74
TDP1-215ENST00000556498 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 LENEPQ9Y5L5 61 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
TDP1-215ENST00000556498 KIAA0100Q14667 2235 aaKnown RBP4.19□□□□□ -1.74
TDP1-215ENST00000556498 IGKV1OR2-108A0A075B7D4 117 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 IGHV4-61A0A0C4DH41 118 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 LRCOL1A6NCL2 159 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 A8MU10 97 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 B4DSR2 109 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 K7ERS5 55 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 NDUFA1O15239 70 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 LINC01565O15544 149 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 IGHV3-11P01762 117 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 IGHV4-59P01825 116 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 BRWD1-AS2P59051 145 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 C9orf66Q5T8R8 295 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 COL4A2P08572 1712 aa4.18□□□□□ -1.74
TDP1-215ENST00000556498 IGHV3-73A0A0B4J1V6 119 aa4.17□□□□□ -1.74
TDP1-215ENST00000556498 IGHV1-18A0A0C4DH31 117 aa4.17□□□□□ -1.74
TDP1-215ENST00000556498 H3BPC8 53 aa4.17□□□□□ -1.74
TDP1-215ENST00000556498 CHTF8P0CG12 524 aa4.17□□□□□ -1.74
TDP1-215ENST00000556498 CNBPP62633 177 aaKnown RBP4.17□□□□□ -1.74
TDP1-215ENST00000556498 HIGD2AQ9BW72 106 aa4.17□□□□□ -1.74
TDP1-215ENST00000556498 DPM3Q9P2X0 92 aa4.17□□□□□ -1.74
TDP1-215ENST00000556498 IGHV4OR15-8A0A075B7B6 117 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 A0A087WW49 117 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 IGHV3-21A0A0B4J1V1 117 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 NCR3O14931 201 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 RTL8CO15255 209 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 FDCSPQ8NFU4 85 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 CAMK2N2Q96S95 79 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 KLK9Q9UKQ9 250 aa4.16□□□□□ -1.74
TDP1-215ENST00000556498 SRRM5B3KS81 715 aa4.15□□□□□ -1.75
TDP1-215ENST00000556498 TSHBP01222 138 aa4.15□□□□□ -1.75
TDP1-215ENST00000556498 C17orf58Q2M2W7 97 aa4.15□□□□□ -1.75
TDP1-215ENST00000556498 HCP5Q6MZN7 132 aa4.15□□□□□ -1.75
TDP1-215ENST00000556498 Q6ZQT0 140 aa4.15□□□□□ -1.75
TDP1-215ENST00000556498 IGHV3OR16-8A0A075B7F1 116 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 IGHV4-38-2P0DP08 117 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 DSCR9P59020 149 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 NDPQ00604 133 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 CSNK1G2-AS1Q8NCQ2 148 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 Q8NDZ9 215 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 MUC7Q8TAX7 377 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 COX7B2Q8TF08 81 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 FGF23Q9GZV9 251 aaPredicted RBP4.14□□□□□ -1.75
TDP1-215ENST00000556498 PLAC8Q9NZF1 115 aa4.14□□□□□ -1.75
TDP1-215ENST00000556498 GOLGA4Q13439 2230 aaKnown RBP4.13□□□□□ -1.75
TDP1-215ENST00000556498 IGLV5-45A0A087WSX0 123 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 A0A087WSZ3 146 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 IGHV3-38A0A0C4DH36 116 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 RNASE13Q5GAN3 156 aaKnown RBP4.13□□□□□ -1.75
TDP1-215ENST00000556498 FAM27BQ5VT28 67 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 NPBQ8NG41 125 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 WFDC10AQ9H1F0 79 aa4.13□□□□□ -1.75
TDP1-215ENST00000556498 ABCA7Q8IZY2 2146 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 CABIN1Q9Y6J0 2220 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 IGHV3-49A0A0A0MS15 119 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 GAS8-AS1O95177 125 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 TFF1P04155 84 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 KPRPQ5T749 579 aaPredicted RBP4.12□□□□□ -1.75
TDP1-215ENST00000556498 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 PCNX2A6NKB5 2137 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 FREM3P0C091 2139 aa4.12□□□□□ -1.75
TDP1-215ENST00000556498 IGKV1D-37A0A075B6S9 117 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 ETDCA0A1B0GVM5 59 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 LECT2O14960 151 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 IGHV3-23P01764 117 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 POLR2KP53803 58 aaKnown RBP4.11□□□□□ -1.75
TDP1-215ENST00000556498 CASC10Q5T4H9 136 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 DEFB123Q8N688 67 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 CACNA1IQ9P0X4 2223 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 LRRK1Q38SD2 2015 aa4.11□□□□□ -1.75
TDP1-215ENST00000556498 SHANK1Q9Y566 2161 aa4.1□□□□□ -1.75
TDP1-215ENST00000556498 MUC22E2RYF6 1773 aaPredicted RBP4.1□□□□□ -1.75
TDP1-215ENST00000556498 IGKV3D-15A0A087WSY6 115 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms