RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PFDN1O60925 122 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 IFNA7P01567 189 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 IGKV4-1P06312 121 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 RPL28P46779 137 aaKnown RBP1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 RBP2P50120 134 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 HSPE1P61604 102 aaKnown RBP1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 GNG5P63218 68 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 CCL20P78556 96 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 KHDC3LQ587J8 217 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 DPPA3Q6W0C5 159 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 AKAP14Q86UN6 197 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 LINC00304Q8N9R0 145 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 DYDC1Q8WWB3 177 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 YPEL2Q96QA6 119 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 DERL1Q9BUN8 251 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 TAF9BQ9HBM6 251 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 BIN3Q9NQY0 253 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 HHLA3Q9XRX5 114 aa1.51□□□□□ -2.17
EFCAB11-210ENST00000556078 IGLV10-54A0A075B6I4 117 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 TRAV12-2A0A075B6T6 113 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 SDHAF1A6NFY7 115 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 J3QQQ9 107 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 GEMIN2O14893 280 aaKnown RBP1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 PITX3O75364 302 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 APOA2P02652 100 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 SAA1P0DJI8 122 aaPredicted RBP1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 DEFA4P12838 97 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 IDO1P14902 403 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 HTN1P15515 57 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 SPRR2EP22531 72 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 SPRR2BP35325 72 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 SPRR2AP35326 72 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 POLR2JP52435 117 aaKnown RBP1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 LINC01556Q5JQF7 62 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 Q6Q795 121 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 LYZL1Q6UWQ5 148 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 TOMM20LQ6UXN7 152 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 Q6ZTI0 123 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 SPACA4Q8TDM5 124 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 GINS3Q9BRX5 216 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 NDUFB11Q9NX14 153 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 PLAC8Q9NZF1 115 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 JPT1Q9UK76 154 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 TRAPPC2LQ9UL33 140 aa1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 RBM7Q9Y580 266 aaKnown RBP1.5□□□□□ -2.17
EFCAB11-210ENST00000556078 IGLC7A0M8Q6 106 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 HMSDA8MTL9 139 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 H7C2G1 150 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 K7EIM0 57 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 K7EP13 123 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 SULT1C4O75897 302 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 IGKV1-5P01602 117 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 NFYAP23511 347 aaPredicted RBP1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 CRYBA4P53673 196 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 PIGPP57054 158 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 YPEL3P61236 119 aaPredicted RBP1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 PSG9Q00887 426 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 ZNF90Q03938 601 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 NDUFA5Q16718 116 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 SPINK13Q1W4C9 94 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 CCDC153Q494R4 210 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 BCL2L15Q5TBC7 163 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 MIR17HGQ75NE6 70 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 HIST3H2BBQ8N257 126 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 C10orf126Q8N4M7 172 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 LZICQ8WZA0 190 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 OSTCQ9NRP0 149 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 LYRM2Q9NU23 88 aaPredicted RBP1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 CKLFQ9UBR5 152 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 TP73-AS1Q9UF72 201 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 OR52A1Q9UKL2 312 aa1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 TIMM8BQ9Y5J9 83 aaPredicted RBP1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
EFCAB11-210ENST00000556078 TRAV7A0A075B6U4 112 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 RIIAD1A6NNX1 92 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 TMEM14DPA8MWL7 114 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 ZNF73O43830 326 aaPredicted RBP1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 TRGC1P0CF51 173 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 S100GP29377 79 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 EIF5AP63241 154 aaKnown RBP1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 SLC38A11Q08AI6 406 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 TDRG1Q3Y452 100 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 SCGB2B2Q4G0G5 96 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 OR51A4Q8NGJ6 313 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 MBD3L1Q8WWY6 194 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 C2orf50Q96LR7 162 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 PRNDQ9UKY0 176 aa1.48□□□□□ -2.17
EFCAB11-210ENST00000556078 TRBV19A0A075B6N1 114 aa1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 TRAV4A0A0B4J268 109 aa1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 A8MTW9 85 aa1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 TSTD3H0UI37 97 aa1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 GPR31O00270 319 aa1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 RPSAP08865 295 aaKnown RBP1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 HIST1H1BP16401 226 aaKnown RBP1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 SUPT4H1P63272 117 aaKnown RBP1.47□□□□□ -2.17
EFCAB11-210ENST00000556078 HMGN3Q15651 99 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms