RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 ZNF25P17030 456 aaPredicted RBP10.39□□□□□ -0.75
CHGA-204ENST00000556076 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
CHGA-204ENST00000556076 SUMO2P61956 95 aaKnown RBP10.39□□□□□ -0.75
CHGA-204ENST00000556076 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
CHGA-204ENST00000556076 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 SMKR1H3BMG3 65 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 TSHBP01222 138 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 PPBPP02775 128 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 SMAGPQ0VAQ4 97 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 DGAT2L7PQ6IED9 249 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 RNASEKQ6P5S7 137 aaKnown RBP10.38□□□□□ -0.75
CHGA-204ENST00000556076 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 NRACQ8N912 160 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 BTF3L4Q96K17 158 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 SEC11CQ9BY50 192 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
CHGA-204ENST00000556076 TRBV24-1A0A075B6N3 115 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 TCAPO15273 167 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 ESDP10768 282 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 FCER1GP30273 86 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 COMMD7Q86VX2 200 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 C15orf56Q8N910 161 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 TMEM101Q96IK0 257 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 IMMP2LQ96T52 175 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
CHGA-204ENST00000556076 J3QL48 77 aa10.36□□□□□ -0.75
CHGA-204ENST00000556076 PHOX2AO14813 284 aa10.36□□□□□ -0.75
CHGA-204ENST00000556076 CHTF8P0CG12 524 aa10.36□□□□□ -0.75
CHGA-204ENST00000556076 FGF6P10767 208 aa10.36□□□□□ -0.75
CHGA-204ENST00000556076 HNRNPA3P51991 378 aaKnown RBP10.36□□□□□ -0.75
CHGA-204ENST00000556076 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
CHGA-204ENST00000556076 CTDSP1Q9GZU7 261 aa10.36□□□□□ -0.75
CHGA-204ENST00000556076 C7orf77A4D0Y5 90 aa10.35□□□□□ -0.75
CHGA-204ENST00000556076 HIGD2BQ4VC39 106 aa10.35□□□□□ -0.75
CHGA-204ENST00000556076 D6R8Y8 96 aa10.34□□□□□ -0.75
CHGA-204ENST00000556076 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
CHGA-204ENST00000556076 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
CHGA-204ENST00000556076 CNBPP62633 177 aaKnown RBP10.34□□□□□ -0.75
CHGA-204ENST00000556076 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
CHGA-204ENST00000556076 CLRN3Q8NCR9 226 aa10.34□□□□□ -0.75
CHGA-204ENST00000556076 CHCHD10Q8WYQ3 142 aaPredicted RBP10.34□□□□□ -0.75
CHGA-204ENST00000556076 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
CHGA-204ENST00000556076 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
CHGA-204ENST00000556076 OR5A1Q8NGJ0 315 aa10.33□□□□□ -0.76
CHGA-204ENST00000556076 FAT3Q8TDW7 4589 aa10.33□□□□□ -0.76
CHGA-204ENST00000556076 TRAV9-1A0A075B6T8 112 aa10.32□□□□□ -0.76
CHGA-204ENST00000556076 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
CHGA-204ENST00000556076 TMEM136Q6ZRR5 245 aa10.32□□□□□ -0.76
CHGA-204ENST00000556076 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
CHGA-204ENST00000556076 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
CHGA-204ENST00000556076 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
CHGA-204ENST00000556076 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
CHGA-204ENST00000556076 IGHV3-64A0A075B6Q5 118 aa10.3□□□□□ -0.76
CHGA-204ENST00000556076 S100PP25815 95 aa10.3□□□□□ -0.76
CHGA-204ENST00000556076 XCL1P47992 114 aa10.3□□□□□ -0.76
CHGA-204ENST00000556076 FOXI1Q12951 378 aa10.3□□□□□ -0.76
CHGA-204ENST00000556076 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
CHGA-204ENST00000556076 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
CHGA-204ENST00000556076 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
CHGA-204ENST00000556076 NPYP01303 97 aa10.29□□□□□ -0.76
CHGA-204ENST00000556076 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
CHGA-204ENST00000556076 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
CHGA-204ENST00000556076 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
CHGA-204ENST00000556076 CCL25O15444 150 aa10.28□□□□□ -0.76
CHGA-204ENST00000556076 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
CHGA-204ENST00000556076 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
CHGA-204ENST00000556076 ZNF664Q8N3J9 261 aa10.28□□□□□ -0.76
CHGA-204ENST00000556076 DPH3Q96FX2 82 aa10.28□□□□□ -0.76
CHGA-204ENST00000556076 TIMM21Q9BVV7 248 aa10.28□□□□□ -0.76
CHGA-204ENST00000556076 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
CHGA-204ENST00000556076 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
CHGA-204ENST00000556076 A0A087WYN8 130 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.77
CHGA-204ENST00000556076 PRSS47A8MTI9 375 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 RAB5AP20339 215 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 COX6A2Q02221 97 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 RHEBQ15382 184 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 SS18Q15532 418 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.77
CHGA-204ENST00000556076 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
CHGA-204ENST00000556076 IGKV2-24A0A0C4DH68 120 aa10.25□□□□□ -0.77
CHGA-204ENST00000556076 COX19Q49B96 90 aa10.25□□□□□ -0.77
CHGA-204ENST00000556076 GVQW2A0A096LPI5 108 aaPredicted RBP10.24□□□□□ -0.77
CHGA-204ENST00000556076 NDUFA5Q16718 116 aa10.24□□□□□ -0.77
CHGA-204ENST00000556076 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
CHGA-204ENST00000556076 C1orf196B1AJZ1 125 aa10.23□□□□□ -0.77
CHGA-204ENST00000556076 RPS10P5Q9NQ39 176 aa10.23□□□□□ -0.77
CHGA-204ENST00000556076 A0A096LNI7 61 aa10.22□□□□□ -0.77
CHGA-204ENST00000556076 LOC389332A0A1B0GUA5 103 aa10.22□□□□□ -0.77
CHGA-204ENST00000556076 K7EMI3 77 aa10.22□□□□□ -0.77
CHGA-204ENST00000556076 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
CHGA-204ENST00000556076 Q8N8P6 123 aa10.22□□□□□ -0.77
CHGA-204ENST00000556076 GNB1LQ9BYB4 327 aa10.22□□□□□ -0.77
CHGA-204ENST00000556076 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
CHGA-204ENST00000556076 CD164L2Q6UWJ8 174 aa10.21□□□□□ -0.77
CHGA-204ENST00000556076 Q6ZUT4 128 aa10.21□□□□□ -0.77
CHGA-204ENST00000556076 NXT2Q9NPJ8 142 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms