RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 LINC00959A0A1B0GUT2 108 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 VCYO14598 125 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 MT1HL1P0DM35 61 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 RAB4AP20338 218 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 FOXI1Q12951 378 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 SS18Q15532 418 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 CD164L2Q6UWJ8 174 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 MRAP2Q96G30 205 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 CDC42SE2Q9NRR3 84 aa4.91□□□□□ -1.62
PTCSC3-201ENST00000556013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 IGKV3OR2-268A0A0C4DH90 116 aa4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 IGKV2-29A2NJV5 120 aaPredicted RBP4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 HIGD1CA8MV81 97 aa4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 C1orf196B1AJZ1 125 aa4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 CHTF8P0CG12 524 aa4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 ZNF664Q8N3J9 261 aa4.9□□□□□ -1.63
PTCSC3-201ENST00000556013 C7orf77A4D0Y5 90 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 LINC00862A6NCI5 91 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 PHOX2AO14813 284 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 PPP1R2P9O14990 202 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 TCAPO15273 167 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 TSHBP01222 138 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 RIGQ13278 110 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 FAM74A3Q4VXF1 159 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 LINC01551Q86U37 167 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 STPG4Q8N801 248 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 ISOC2Q96AB3 205 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 EIF5A2Q9GZV4 153 aaKnown RBP4.89□□□□□ -1.63
PTCSC3-201ENST00000556013 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 ZNF727A8MUV8 499 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 ZNF561-AS1K7EIQ3 104 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 XCL1P47992 114 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 HIGD2BQ4VC39 106 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 ALKAL2Q6UX46 152 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 AKAP14Q86UN6 197 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 TMEM18Q96B42 140 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 KIR2DL4Q99706 377 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 SMIM7Q9BQ49 75 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 TIMM21Q9BVV7 248 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 SMDT1Q9H4I9 107 aa4.88□□□□□ -1.63
PTCSC3-201ENST00000556013 TRBV24-1A0A075B6N3 115 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 IGKV2-24A0A0C4DH68 120 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 A0A1B0GW15 77 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 F8WDY8 70 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 RPL32P62910 135 aaKnown RBP4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 SYCNQ0VAF6 134 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 Q6ZRP5 223 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 NUP35Q8NFH5 326 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 CARD19Q96LW7 228 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 C20orf78Q9BR46 151 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 TMEM242Q9NWH2 141 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 NAT8BQ9UHF3 227 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 V9GYV3 84 aa4.87□□□□□ -1.63
PTCSC3-201ENST00000556013 IGLV4-69A0A075B6H9 119 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 A0A096LNI7 61 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 GAS8-AS1O95177 125 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 APOMO95445 188 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 FCER1GP30273 86 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 PRR3P79522 188 aaKnown RBP4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 RNF151Q2KHN1 245 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 FAM104BQ5XKR9 115 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 REG3GQ6UW15 175 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 AMN1Q8IY45 258 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 NRACQ8N912 160 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
PTCSC3-201ENST00000556013 A0A0J9YXV3 536 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 LOC107984640A0A0U1RRK4 108 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 COX7A2LO14548 114 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 MALP21145 153 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 CAMPP49913 170 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 CEBPGP53567 150 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 KRTAP10-8P60410 259 aa4.85□□□□□ -1.63
PTCSC3-201ENST00000556013 SMIM27A0A1W2PRY6 76 aa4.84□□□□□ -1.63
PTCSC3-201ENST00000556013 S100A8P05109 93 aa4.84□□□□□ -1.63
PTCSC3-201ENST00000556013 RPL23P62829 140 aaKnown RBP4.84□□□□□ -1.63
PTCSC3-201ENST00000556013 NAT8Q9UHE5 227 aa4.84□□□□□ -1.63
PTCSC3-201ENST00000556013 PPBPP02775 128 aa4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 MRPS36P82909 103 aaKnown RBP4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 PEA15Q15121 130 aa4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 OR10D4PQ8NGN7 298 aa4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 MRPL35Q9NZE8 188 aaKnown RBP4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 LRP2P98164 4655 aa4.83□□□□□ -1.64
PTCSC3-201ENST00000556013 TRAV13-1A0A0B4J241 112 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 IGHV3OR16-9A0A0B4J2B5 98 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 F8W036 122 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 CKS2P33552 79 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 GAGE2BQ13066 116 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms