RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 CIRBPQ14011 172 aaKnown RBP11.35□□□□□ -0.59
NPC2-208ENST00000556009 FAM104BQ5XKR9 115 aa11.35□□□□□ -0.59
NPC2-208ENST00000556009 RASL11AQ6T310 242 aa11.35□□□□□ -0.59
NPC2-208ENST00000556009 CBLN2Q8IUK8 224 aa11.35□□□□□ -0.59
NPC2-208ENST00000556009 C20orf203Q8NBC4 194 aa11.35□□□□□ -0.59
NPC2-208ENST00000556009 SMCO4Q9NRQ5 59 aa11.35□□□□□ -0.59
NPC2-208ENST00000556009 PANO1I0J062 215 aa11.34□□□□□ -0.59
NPC2-208ENST00000556009 TGIF2-C20orf24A0A0A6YYL0 155 aa11.33□□□□□ -0.6
NPC2-208ENST00000556009 S100A1P23297 94 aa11.33□□□□□ -0.6
NPC2-208ENST00000556009 MRPL51Q4U2R6 128 aaKnown RBP11.33□□□□□ -0.6
NPC2-208ENST00000556009 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
NPC2-208ENST00000556009 MRAP2Q96G30 205 aa11.32□□□□□ -0.6
NPC2-208ENST00000556009 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
NPC2-208ENST00000556009 TMEM243Q9BU79 118 aa11.32□□□□□ -0.6
NPC2-208ENST00000556009 NIT2Q9NQR4 276 aa11.32□□□□□ -0.6
NPC2-208ENST00000556009 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
NPC2-208ENST00000556009 TRBV24-1A0A075B6N3 115 aa11.31□□□□□ -0.6
NPC2-208ENST00000556009 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
NPC2-208ENST00000556009 IGLV4-60A0A075B6I1 120 aa11.3□□□□□ -0.6
NPC2-208ENST00000556009 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
NPC2-208ENST00000556009 GAS8-AS1O95177 125 aa11.3□□□□□ -0.6
NPC2-208ENST00000556009 NCR2O95944 276 aa11.3□□□□□ -0.6
NPC2-208ENST00000556009 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
NPC2-208ENST00000556009 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
NPC2-208ENST00000556009 SCO1O75880 301 aa11.29□□□□□ -0.6
NPC2-208ENST00000556009 COX19Q49B96 90 aa11.29□□□□□ -0.6
NPC2-208ENST00000556009 RPL39LQ96EH5 51 aaKnown RBP11.29□□□□□ -0.6
NPC2-208ENST00000556009 GNB1LQ9BYB4 327 aa11.29□□□□□ -0.6
NPC2-208ENST00000556009 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
NPC2-208ENST00000556009 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
NPC2-208ENST00000556009 SLPIP03973 132 aa11.28□□□□□ -0.6
NPC2-208ENST00000556009 CKS2P33552 79 aa11.28□□□□□ -0.6
NPC2-208ENST00000556009 Q6ZRU5 148 aa11.28□□□□□ -0.6
NPC2-208ENST00000556009 D6R8Y8 96 aa11.27□□□□□ -0.61
NPC2-208ENST00000556009 APCSP02743 223 aa11.27□□□□□ -0.61
NPC2-208ENST00000556009 RPS10P46783 165 aaKnown RBP11.27□□□□□ -0.61
NPC2-208ENST00000556009 UBE2L6O14933 153 aa11.26□□□□□ -0.61
NPC2-208ENST00000556009 PPBPP02775 128 aa11.26□□□□□ -0.61
NPC2-208ENST00000556009 COTL1Q14019 142 aa11.26□□□□□ -0.61
NPC2-208ENST00000556009 NRACQ8N912 160 aa11.26□□□□□ -0.61
NPC2-208ENST00000556009 A0A087WYN8 130 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 PPP1R17O96001 155 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 MT-ND6P03923 174 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 AMTP48728 403 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
NPC2-208ENST00000556009 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
NPC2-208ENST00000556009 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
NPC2-208ENST00000556009 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
NPC2-208ENST00000556009 SPACA4Q8TDM5 124 aa11.24□□□□□ -0.61
NPC2-208ENST00000556009 PRELID3AQ96N28 172 aa11.24□□□□□ -0.61
NPC2-208ENST00000556009 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
NPC2-208ENST00000556009 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
NPC2-208ENST00000556009 TNFRSF6BO95407 300 aa11.23□□□□□ -0.61
NPC2-208ENST00000556009 NPYP01303 97 aa11.23□□□□□ -0.61
NPC2-208ENST00000556009 FABP9Q0Z7S8 132 aa11.23□□□□□ -0.61
NPC2-208ENST00000556009 PLAC8Q9NZF1 115 aa11.23□□□□□ -0.61
NPC2-208ENST00000556009 TRAPPC1Q9Y5R8 145 aa11.23□□□□□ -0.61
NPC2-208ENST00000556009 COLCA2A8K830 154 aa11.22□□□□□ -0.61
NPC2-208ENST00000556009 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
NPC2-208ENST00000556009 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.61
NPC2-208ENST00000556009 PHOX2AO14813 284 aa11.21□□□□□ -0.61
NPC2-208ENST00000556009 CHTF8P0CG12 524 aa11.21□□□□□ -0.61
NPC2-208ENST00000556009 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.61
NPC2-208ENST00000556009 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
NPC2-208ENST00000556009 LAMTOR2Q9Y2Q5 125 aa11.21□□□□□ -0.61
NPC2-208ENST00000556009 H7C423 109 aa11.2□□□□□ -0.62
NPC2-208ENST00000556009 PMCHP20382 165 aa11.2□□□□□ -0.62
NPC2-208ENST00000556009 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
NPC2-208ENST00000556009 I3L3M4 83 aa11.19□□□□□ -0.62
NPC2-208ENST00000556009 TNXBP22105 4242 aa11.18□□□□□ -0.62
NPC2-208ENST00000556009 TRBV27A0A0K0K1C4 114 aa11.18□□□□□ -0.62
NPC2-208ENST00000556009 VCYO14598 125 aa11.18□□□□□ -0.62
NPC2-208ENST00000556009 RAB5AP20339 215 aa11.18□□□□□ -0.62
NPC2-208ENST00000556009 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
NPC2-208ENST00000556009 COX6A2Q02221 97 aa11.18□□□□□ -0.62
NPC2-208ENST00000556009 ALKBH7Q9BT30 221 aaPredicted RBP11.18□□□□□ -0.62
NPC2-208ENST00000556009 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
NPC2-208ENST00000556009 C7orf33Q8WU49 177 aa11.17□□□□□ -0.62
NPC2-208ENST00000556009 CHCHD10Q8WYQ3 142 aaPredicted RBP11.17□□□□□ -0.62
NPC2-208ENST00000556009 SMIM2Q9BVW6 85 aa11.17□□□□□ -0.62
NPC2-208ENST00000556009 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
NPC2-208ENST00000556009 GVQW2A0A096LPI5 108 aaPredicted RBP11.16□□□□□ -0.62
NPC2-208ENST00000556009 IGKV3OR2-268A0A0C4DH90 116 aa11.16□□□□□ -0.62
NPC2-208ENST00000556009 LOC389332A0A1B0GUA5 103 aa11.16□□□□□ -0.62
NPC2-208ENST00000556009 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
NPC2-208ENST00000556009 TSHBP01222 138 aa11.16□□□□□ -0.62
NPC2-208ENST00000556009 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
NPC2-208ENST00000556009 PRSS3P2Q8NHM4 247 aa11.15□□□□□ -0.62
NPC2-208ENST00000556009 KIR2DL4Q99706 377 aa11.15□□□□□ -0.62
NPC2-208ENST00000556009 TRGC2P03986 189 aa11.14□□□□□ -0.63
NPC2-208ENST00000556009 FGF6P10767 208 aa11.14□□□□□ -0.63
NPC2-208ENST00000556009 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
NPC2-208ENST00000556009 FCER1GP30273 86 aa11.14□□□□□ -0.63
NPC2-208ENST00000556009 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
NPC2-208ENST00000556009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.13□□□□□ -0.63
NPC2-208ENST00000556009 IGKV2-29A2NJV5 120 aaPredicted RBP11.13□□□□□ -0.63
NPC2-208ENST00000556009 FOXI1Q12951 378 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms