RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TRGV1A0A0A0MS02 117 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 I3L3M4 83 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 CIDEAO60543 219 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 PRM2P04554 102 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 EGFEM1PQ0D2K5 195 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 DAZ2Q13117 558 aaKnown RBP4.88□□□□□ -1.63
SLIRP-204ENST00000555890 CFAP126Q5VTH2 177 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 Q6ZN92 141 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 OR4C5Q8NGB2 326 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 RNASE8Q8TDE3 154 aaKnown RBP4.88□□□□□ -1.63
SLIRP-204ENST00000555890 TOMM6Q96B49 74 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 MIEN1Q9BRT3 115 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 CYSLTR1Q9Y271 337 aa4.88□□□□□ -1.63
SLIRP-204ENST00000555890 NACAE9PAV3 2078 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 IGHV3-73A0A0B4J1V6 119 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 SMIM9A6NGZ8 99 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 IGHV3-53P01767 116 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 GIG44P09565 113 aaPredicted RBP4.87□□□□□ -1.63
SLIRP-204ENST00000555890 APOC4P55056 127 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 RHOHQ15669 191 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 UFSP1Q6NVU6 142 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 C2orf66Q6UXQ4 117 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 CSNK1G2-AS1Q8NCQ2 148 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 KIR2DL5BQ8NHK3 375 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 UQCR10Q9UDW1 63 aa4.87□□□□□ -1.63
SLIRP-204ENST00000555890 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
SLIRP-204ENST00000555890 TRAV12-1A0A0B4J245 112 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 TRAV4A0A0B4J268 109 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 IGLC3P0DOY3 106 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 NEGR1Q7Z3B1 354 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 ERASQ7Z444 233 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 TMEM141Q96I45 108 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 OVOL2Q9BRP0 275 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 NOP10Q9NPE3 64 aaKnown RBP4.86□□□□□ -1.63
SLIRP-204ENST00000555890 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
SLIRP-204ENST00000555890 TRGV2A0A075B6R0 118 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 A0A087WX48 190 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 hDV102S1A0JD36 115 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 DPM2O94777 84 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 LY6G6CO95867 125 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 IGKCP01834 107 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 INAFM2P0DMQ5 153 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 MAJINQ3KP22 176 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 Q6ZTI0 123 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 TP53TG1Q9Y2A0 90 aa4.85□□□□□ -1.63
SLIRP-204ENST00000555890 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE7O76087 117 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 TSHBP01222 138 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE12FP0CL80 117 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE12GP0CL81 117 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 GAGE12IP0CL82 117 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 PLNP26678 52 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
SLIRP-204ENST00000555890 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
SLIRP-204ENST00000555890 PAPPA-AS1Q5QFB9 102 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 SLC25A34Q6PIV7 304 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 MRPL52Q86TS9 123 aaKnown RBP4.84□□□□□ -1.63
SLIRP-204ENST00000555890 C20orf203Q8NBC4 194 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 NEXN-AS1Q8NBZ9 246 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
SLIRP-204ENST00000555890 C14orf144Q96I85 54 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 TIMM17AQ99595 171 aa4.84□□□□□ -1.63
SLIRP-204ENST00000555890 CHTOPQ9Y3Y2 248 aaKnown RBP4.84□□□□□ -1.63
SLIRP-204ENST00000555890 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 TRBV7-3A0A075B6L6 115 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 TRGV4A0A0C4DH28 118 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 PLAC8L1A1L4L8 177 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 IGIPA6NJ69 53 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 F8VRH5 84 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 K7EQD1 137 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 M0R143 59 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 P0DMU3 169 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 FAM231AP0DMU4 169 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 FAM231CP0DMU5 169 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 COTL1Q14019 142 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 PMVKQ15126 192 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 LBHQ53QV2 105 aaPredicted RBP4.83□□□□□ -1.64
SLIRP-204ENST00000555890 BAALCQ8WXS3 180 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 ZNF479Q96JC4 524 aa4.83□□□□□ -1.64
SLIRP-204ENST00000555890 MRPL35Q9NZE8 188 aaKnown RBP4.83□□□□□ -1.64
SLIRP-204ENST00000555890 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
SLIRP-204ENST00000555890 TRBV6-4A0A1B0GX49 114 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 COX8AP10176 69 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 EMP1P54849 157 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
SLIRP-204ENST00000555890 SMAGPQ0VAQ4 97 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 STPG4Q8N801 248 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 ZNRF2Q8NHG8 242 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 PYGO1Q9Y3Y4 419 aa4.82□□□□□ -1.64
SLIRP-204ENST00000555890 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
SLIRP-204ENST00000555890 LYRM9A8MSI8 78 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 DEFB130BP0DP73 79 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 DEFB130AP0DP74 79 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 MIFP14174 115 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 CRYBA4P53673 196 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 RPL39P62891 51 aaKnown RBP4.81□□□□□ -1.64
SLIRP-204ENST00000555890 CTAG1AP78358 180 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms