RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 POLR2KP53803 58 aaKnown RBP15.67■□□□□ 0.1
PRKCH-216ENST00000555542 SRSF3P84103 164 aaKnown RBP15.67■□□□□ 0.1
PRKCH-216ENST00000555542 HERC1Q15751 4861 aa15.67■□□□□ 0.1
PRKCH-216ENST00000555542 VCYO14598 125 aa15.66■□□□□ 0.1
PRKCH-216ENST00000555542 CAMPP49913 170 aa15.65■□□□□ 0.1
PRKCH-216ENST00000555542 KRTAP10-4P60372 401 aaPredicted RBP15.65■□□□□ 0.1
PRKCH-216ENST00000555542 SMDT1Q9H4I9 107 aa15.65■□□□□ 0.1
PRKCH-216ENST00000555542 LINC00959A0A1B0GUT2 108 aa15.64■□□□□ 0.09
PRKCH-216ENST00000555542 CCL25O15444 150 aa15.64■□□□□ 0.09
PRKCH-216ENST00000555542 SUMO2P61956 95 aaKnown RBP15.64■□□□□ 0.09
PRKCH-216ENST00000555542 SS18Q15532 418 aa15.64■□□□□ 0.09
PRKCH-216ENST00000555542 SMIM27A0A1W2PRY6 76 aa15.63■□□□□ 0.09
PRKCH-216ENST00000555542 KRTAP29-1A8MX34 341 aaPredicted RBP15.63■□□□□ 0.09
PRKCH-216ENST00000555542 FOXI1Q12951 378 aa15.63■□□□□ 0.09
PRKCH-216ENST00000555542 KIR2DL4Q99706 377 aa15.63■□□□□ 0.09
PRKCH-216ENST00000555542 PPP1R2P9O14990 202 aa15.62■□□□□ 0.09
PRKCH-216ENST00000555542 CHTF8P0CG12 524 aa15.62■□□□□ 0.09
PRKCH-216ENST00000555542 MRPL52Q86TS9 123 aaKnown RBP15.62■□□□□ 0.09
PRKCH-216ENST00000555542 NRACQ8N912 160 aa15.62■□□□□ 0.09
PRKCH-216ENST00000555542 GVQW2A0A096LPI5 108 aaPredicted RBP15.61■□□□□ 0.09
PRKCH-216ENST00000555542 A0A1B0GW15 77 aa15.61■□□□□ 0.09
PRKCH-216ENST00000555542 SMAGPQ0VAQ4 97 aa15.61■□□□□ 0.09
PRKCH-216ENST00000555542 MRPL51Q4U2R6 128 aaKnown RBP15.61■□□□□ 0.09
PRKCH-216ENST00000555542 FAM104BQ5XKR9 115 aa15.61■□□□□ 0.09
PRKCH-216ENST00000555542 ZNF664Q8N3J9 261 aa15.61■□□□□ 0.09
PRKCH-216ENST00000555542 CDC42SE2Q9NRR3 84 aa15.61■□□□□ 0.09
PRKCH-216ENST00000555542 CIRBPQ14011 172 aaKnown RBP15.6■□□□□ 0.09
PRKCH-216ENST00000555542 CKS2P33552 79 aa15.59■□□□□ 0.09
PRKCH-216ENST00000555542 COX6A2Q02221 97 aa15.59■□□□□ 0.09
PRKCH-216ENST00000555542 SPACA4Q8TDM5 124 aa15.59■□□□□ 0.09
PRKCH-216ENST00000555542 A0A087WYN8 130 aa15.58■□□□□ 0.08
PRKCH-216ENST00000555542 IGHV1-58A0A0C4DH39 117 aa15.58■□□□□ 0.08
PRKCH-216ENST00000555542 S100A8P05109 93 aa15.58■□□□□ 0.08
PRKCH-216ENST00000555542 MRPL54Q6P161 138 aaKnown RBP15.58■□□□□ 0.08
PRKCH-216ENST00000555542 LINC00862A6NCI5 91 aa15.57■□□□□ 0.08
PRKCH-216ENST00000555542 TMEM18Q96B42 140 aa15.57■□□□□ 0.08
PRKCH-216ENST00000555542 IGKV2-24A0A0C4DH68 120 aa15.56■□□□□ 0.08
PRKCH-216ENST00000555542 F8W036 122 aa15.56■□□□□ 0.08
PRKCH-216ENST00000555542 HBBP68871 147 aa15.56■□□□□ 0.08
PRKCH-216ENST00000555542 CD164L2Q6UWJ8 174 aa15.56■□□□□ 0.08
PRKCH-216ENST00000555542 C20orf78Q9BR46 151 aa15.55■□□□□ 0.08
PRKCH-216ENST00000555542 UBE2D4Q9Y2X8 147 aa15.55■□□□□ 0.08
PRKCH-216ENST00000555542 MAJINQ3KP22 176 aa15.54■□□□□ 0.08
PRKCH-216ENST00000555542 RNASE13Q5GAN3 156 aaKnown RBP15.54■□□□□ 0.08
PRKCH-216ENST00000555542 PRSS3P2Q8NHM4 247 aa15.54■□□□□ 0.08
PRKCH-216ENST00000555542 ZNF561-AS1K7EIQ3 104 aa15.53■□□□□ 0.08
PRKCH-216ENST00000555542 OXTP01178 125 aa15.53■□□□□ 0.08
PRKCH-216ENST00000555542 MALP21145 153 aa15.53■□□□□ 0.08
PRKCH-216ENST00000555542 LINC00526Q96FQ7 95 aa15.53■□□□□ 0.08
PRKCH-216ENST00000555542 CSDC2Q9Y534 153 aaKnown RBP15.53■□□□□ 0.08
PRKCH-216ENST00000555542 C1orf196B1AJZ1 125 aa15.52■□□□□ 0.08
PRKCH-216ENST00000555542 D6R8Y8 96 aa15.52■□□□□ 0.08
PRKCH-216ENST00000555542 TNFRSF6BO95407 300 aa15.52■□□□□ 0.08
PRKCH-216ENST00000555542 CARD19Q96LW7 228 aa15.52■□□□□ 0.08
PRKCH-216ENST00000555542 PKIGQ9Y2B9 76 aa15.52■□□□□ 0.08
PRKCH-216ENST00000555542 TRBV24-1A0A075B6N3 115 aa15.51■□□□□ 0.07
PRKCH-216ENST00000555542 TRAV13-1A0A0B4J241 112 aa15.51■□□□□ 0.07
PRKCH-216ENST00000555542 TCAPO15273 167 aa15.51■□□□□ 0.07
PRKCH-216ENST00000555542 PLAC8Q9NZF1 115 aa15.51■□□□□ 0.07
PRKCH-216ENST00000555542 HNRNPA3P51991 378 aaKnown RBP15.5■□□□□ 0.07
PRKCH-216ENST00000555542 C7orf33Q8WU49 177 aa15.5■□□□□ 0.07
PRKCH-216ENST00000555542 COX7A2LO14548 114 aa15.49■□□□□ 0.07
PRKCH-216ENST00000555542 RAB14P61106 215 aa15.49■□□□□ 0.07
PRKCH-216ENST00000555542 Q6ZUT4 128 aa15.49■□□□□ 0.07
PRKCH-216ENST00000555542 SMIM2Q9BVW6 85 aa15.49■□□□□ 0.07
PRKCH-216ENST00000555542 A0A1B0GXF2 115 aa15.48■□□□□ 0.07
PRKCH-216ENST00000555542 RPL32P62910 135 aaKnown RBP15.48■□□□□ 0.07
PRKCH-216ENST00000555542 STPG4Q8N801 248 aa15.48■□□□□ 0.07
PRKCH-216ENST00000555542 A0A096LNI7 61 aa15.47■□□□□ 0.07
PRKCH-216ENST00000555542 SYCNQ0VAF6 134 aa15.47■□□□□ 0.07
PRKCH-216ENST00000555542 TIMM21Q9BVV7 248 aa15.47■□□□□ 0.07
PRKCH-216ENST00000555542 NPYP01303 97 aa15.46■□□□□ 0.07
PRKCH-216ENST00000555542 PPBPP02775 128 aa15.46■□□□□ 0.07
PRKCH-216ENST00000555542 ATP5L2Q7Z4Y8 100 aa15.46■□□□□ 0.07
PRKCH-216ENST00000555542 LINC00474Q9P2X8 69 aa15.46■□□□□ 0.07
PRKCH-216ENST00000555542 PHOX2AO14813 284 aa15.45■□□□□ 0.06
PRKCH-216ENST00000555542 RPL39P62891 51 aaKnown RBP15.45■□□□□ 0.06
PRKCH-216ENST00000555542 ORMDL3Q8N138 153 aa15.44■□□□□ 0.06
PRKCH-216ENST00000555542 IGLV4-69A0A075B6H9 119 aa15.43■□□□□ 0.06
PRKCH-216ENST00000555542 PNRC1Q12796 327 aaPredicted RBP15.43■□□□□ 0.06
PRKCH-216ENST00000555542 C5orf38Q86SI9 138 aa15.43■□□□□ 0.06
PRKCH-216ENST00000555542 APOMO95445 188 aa15.42■□□□□ 0.06
PRKCH-216ENST00000555542 RAB5AP20339 215 aa15.42■□□□□ 0.06
PRKCH-216ENST00000555542 TMEM136Q6ZRR5 245 aa15.42■□□□□ 0.06
PRKCH-216ENST00000555542 SPANXA1Q9NS26 97 aa15.42■□□□□ 0.06
PRKCH-216ENST00000555542 PRELID3AQ96N28 172 aa15.41■□□□□ 0.06
PRKCH-216ENST00000555542 CAMK2N2Q96S95 79 aa15.41■□□□□ 0.06
PRKCH-216ENST00000555542 MT-ND4LP03901 98 aa15.4■□□□□ 0.06
PRKCH-216ENST00000555542 LRP1Q07954 4544 aaKnown RBP15.4■□□□□ 0.06
PRKCH-216ENST00000555542 PKHD1L1Q86WI1 4243 aa15.39■□□□□ 0.05
PRKCH-216ENST00000555542 Q6ZRU5 148 aa15.39■□□□□ 0.05
PRKCH-216ENST00000555542 ANAPC16Q96DE5 110 aa15.39■□□□□ 0.05
PRKCH-216ENST00000555542 GAGE2BQ13066 116 aa15.38■□□□□ 0.05
PRKCH-216ENST00000555542 SERTAD4-AS1Q5TG53 156 aa15.38■□□□□ 0.05
PRKCH-216ENST00000555542 OPRPNQ99935 248 aaPredicted RBP15.38■□□□□ 0.05
PRKCH-216ENST00000555542 LOC107984640A0A0U1RRK4 108 aa15.37■□□□□ 0.05
PRKCH-216ENST00000555542 IFITM10A6NMD0 228 aa15.37■□□□□ 0.05
PRKCH-216ENST00000555542 SPAG11BQ08648 103 aa15.37■□□□□ 0.05
PRKCH-216ENST00000555542 IFI27P40305 119 aaPredicted RBP15.36■□□□□ 0.05
PRKCH-216ENST00000555542 MRPS36P82909 103 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms