RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 GAGE5Q13069 117 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 LAGE3Q14657 143 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 RHOHQ15669 191 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 SPATA12Q7Z6I5 190 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 Q8N976 141 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 OR10D4PQ8NGN7 298 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 CHCHD7Q9BUK0 85 aa4.36□□□□□ -1.71
LINC00643-203ENST00000555518 STARD9Q9P2P6 4700 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 I3L3M4 83 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 K7EMI3 77 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 HBDP02042 147 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 S100A2P29034 98 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 DEFA6Q01524 100 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 NTM-AS1Q6ZSK4 140 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 ZNRF2Q8NHG8 242 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
LINC00643-203ENST00000555518 FAM104AQ969W3 186 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 TOMM6Q96B49 74 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 PRO0255Q9UI72 69 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 HHLA3Q9XRX5 114 aa4.35□□□□□ -1.71
LINC00643-203ENST00000555518 A0A0J9YY99 117 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 F5H768 121 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 C3orf79P0CE67 100 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 RPL39P62891 51 aaKnown RBP4.34□□□□□ -1.71
LINC00643-203ENST00000555518 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 PYY3Q5JQD4 70 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 C20orf203Q8NBC4 194 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 KIR2DL4Q99706 377 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 PRADC1Q9BSG0 188 aa4.34□□□□□ -1.71
LINC00643-203ENST00000555518 CSMD3Q7Z407 3707 aa4.34□□□□□ -1.72
LINC00643-203ENST00000555518 TRAV26-1A0A087WT03 109 aa4.33□□□□□ -1.72
LINC00643-203ENST00000555518 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
LINC00643-203ENST00000555518 LEPROTL1O95214 131 aa4.33□□□□□ -1.72
LINC00643-203ENST00000555518 HTN3P15516 51 aa4.33□□□□□ -1.72
LINC00643-203ENST00000555518 JOSD1Q15040 202 aaPredicted RBP4.33□□□□□ -1.72
LINC00643-203ENST00000555518 DAZ4Q86SG3 579 aaKnown RBP4.33□□□□□ -1.72
LINC00643-203ENST00000555518 C11orf45Q8TAV5 145 aa4.33□□□□□ -1.72
LINC00643-203ENST00000555518 DAZ3Q9NR90 486 aaKnown RBP4.33□□□□□ -1.72
LINC00643-203ENST00000555518 PLECQ15149 4684 aaKnown RBP4.33□□□□□ -1.72
LINC00643-203ENST00000555518 A0A096LPF7 62 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 H3BNG1 76 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 AKR1D1P51857 326 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 COTL1Q14019 142 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 IFI27L1Q96BM0 104 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 TIMM17AQ99595 171 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 GTSF1LQ9H1H1 148 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 HSPB8Q9UJY1 196 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 CYSLTR1Q9Y271 337 aa4.32□□□□□ -1.72
LINC00643-203ENST00000555518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
LINC00643-203ENST00000555518 DEFB131BA0A096LNP1 70 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
LINC00643-203ENST00000555518 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 SMIM6P0DI80 62 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 KRTDAPP60985 99 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 OPRPNQ99935 248 aaPredicted RBP4.31□□□□□ -1.72
LINC00643-203ENST00000555518 UBE2D4Q9Y2X8 147 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 PYGO1Q9Y3Y4 419 aa4.31□□□□□ -1.72
LINC00643-203ENST00000555518 IGLV4-3A0A075B6K6 122 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 TRAV10A0A0B4J240 114 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 LINC01549A6NIU2 74 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 ATP5LO75964 103 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 MRPL23Q16540 153 aaKnown RBP4.3□□□□□ -1.72
LINC00643-203ENST00000555518 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 CEMP1Q6PRD7 247 aaPredicted RBP4.3□□□□□ -1.72
LINC00643-203ENST00000555518 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 TEX43Q6ZNM6 134 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 ERASQ7Z444 233 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
LINC00643-203ENST00000555518 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 BAALCQ8WXS3 180 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 SCGB3A1Q96QR1 104 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 SPANXA1Q9NS26 97 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 ICOSQ9Y6W8 199 aa4.3□□□□□ -1.72
LINC00643-203ENST00000555518 TRBV25-1A0A075B6N4 114 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.29□□□□□ -1.72
LINC00643-203ENST00000555518 H7C423 109 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 FGF6P10767 208 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 LGALS9CQ6DKI2 356 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 Q6ZUT4 128 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 TMEM141Q96I45 108 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 AMELXQ99217 191 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 PMCHL2Q9BQD1 86 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 TMEM243Q9BU79 118 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
LINC00643-203ENST00000555518 IGLV4-69A0A075B6H9 119 aa4.28□□□□□ -1.72
LINC00643-203ENST00000555518 IGLV4-60A0A075B6I1 120 aa4.28□□□□□ -1.72
LINC00643-203ENST00000555518 A0A087WX48 190 aa4.28□□□□□ -1.72
LINC00643-203ENST00000555518 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
LINC00643-203ENST00000555518 G0S2P27469 103 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms