RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
VRK1-204ENST00000555351 CCL25O15444 150 aa7.6□□□□□ -1.19
VRK1-204ENST00000555351 GAS8-AS1O95177 125 aa7.6□□□□□ -1.19
VRK1-204ENST00000555351 S100A8P05109 93 aa7.6□□□□□ -1.19
VRK1-204ENST00000555351 RPS10P46783 165 aaKnown RBP7.6□□□□□ -1.19
VRK1-204ENST00000555351 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
VRK1-204ENST00000555351 RPL32P62910 135 aaKnown RBP7.6□□□□□ -1.19
VRK1-204ENST00000555351 FAM104BQ5XKR9 115 aa7.6□□□□□ -1.19
VRK1-204ENST00000555351 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
VRK1-204ENST00000555351 TMEM242Q9NWH2 141 aa7.6□□□□□ -1.19
VRK1-204ENST00000555351 TRBV24-1A0A075B6N3 115 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 GVQW2A0A096LPI5 108 aaPredicted RBP7.59□□□□□ -1.19
VRK1-204ENST00000555351 TCAPO15273 167 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 SLPIP03973 132 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 SUMO2P61956 95 aaKnown RBP7.59□□□□□ -1.19
VRK1-204ENST00000555351 NRACQ8N912 160 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 KIR2DL4Q99706 377 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 C20orf78Q9BR46 151 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
VRK1-204ENST00000555351 LINC00959A0A1B0GUT2 108 aa7.58□□□□□ -1.2
VRK1-204ENST00000555351 FCER1GP30273 86 aa7.58□□□□□ -1.2
VRK1-204ENST00000555351 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
VRK1-204ENST00000555351 FOXI1Q12951 378 aa7.58□□□□□ -1.2
VRK1-204ENST00000555351 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
VRK1-204ENST00000555351 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
VRK1-204ENST00000555351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
VRK1-204ENST00000555351 IGKV3OR2-268A0A0C4DH90 116 aa7.57□□□□□ -1.2
VRK1-204ENST00000555351 F8W036 122 aa7.57□□□□□ -1.2
VRK1-204ENST00000555351 SS18Q15532 418 aa7.57□□□□□ -1.2
VRK1-204ENST00000555351 MRPL51Q4U2R6 128 aaKnown RBP7.57□□□□□ -1.2
VRK1-204ENST00000555351 TMEM18Q96B42 140 aa7.57□□□□□ -1.2
VRK1-204ENST00000555351 TIMM21Q9BVV7 248 aa7.57□□□□□ -1.2
VRK1-204ENST00000555351 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
VRK1-204ENST00000555351 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
VRK1-204ENST00000555351 IGHV1-58A0A0C4DH39 117 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 PHOX2AO14813 284 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 OXTP01178 125 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 PPBPP02775 128 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
VRK1-204ENST00000555351 RPL37AP61513 92 aaKnown RBP7.56□□□□□ -1.2
VRK1-204ENST00000555351 HBBP68871 147 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 ATP5L2Q7Z4Y8 100 aa7.56□□□□□ -1.2
VRK1-204ENST00000555351 A0A1B0GXF2 115 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 C1orf196B1AJZ1 125 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 SMKR1H3BMG3 65 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 PANO1I0J062 215 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 CKS2P33552 79 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 CAMPP49913 170 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
VRK1-204ENST00000555351 SPACA4Q8TDM5 124 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
VRK1-204ENST00000555351 XCL1P47992 114 aa7.54□□□□□ -1.2
VRK1-204ENST00000555351 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
VRK1-204ENST00000555351 TNFRSF6BO95407 300 aa7.53□□□□□ -1.2
VRK1-204ENST00000555351 RAB14P61106 215 aa7.53□□□□□ -1.2
VRK1-204ENST00000555351 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
VRK1-204ENST00000555351 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
VRK1-204ENST00000555351 A0A087WYN8 130 aa7.52□□□□□ -1.21
VRK1-204ENST00000555351 COX6A2Q02221 97 aa7.52□□□□□ -1.21
VRK1-204ENST00000555351 DPH3Q96FX2 82 aa7.52□□□□□ -1.21
VRK1-204ENST00000555351 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
VRK1-204ENST00000555351 HERC1Q15751 4861 aa7.51□□□□□ -1.21
VRK1-204ENST00000555351 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
VRK1-204ENST00000555351 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
VRK1-204ENST00000555351 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
VRK1-204ENST00000555351 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
VRK1-204ENST00000555351 LAMTOR2Q9Y2Q5 125 aa7.51□□□□□ -1.21
VRK1-204ENST00000555351 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 D6R8Y8 96 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 COX7A2LO14548 114 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 LCE2BO14633 110 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 MT-ND4LP03901 98 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 MRPS36P82909 103 aaKnown RBP7.5□□□□□ -1.21
VRK1-204ENST00000555351 ORMDL3Q8N138 153 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
VRK1-204ENST00000555351 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
VRK1-204ENST00000555351 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
VRK1-204ENST00000555351 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
VRK1-204ENST00000555351 CARD19Q96LW7 228 aa7.49□□□□□ -1.21
VRK1-204ENST00000555351 F8WDY8 70 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 APOMO95445 188 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 NPYP01303 97 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 MALP21145 153 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 Q6ZRU5 148 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 Q6ZUT4 128 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 C2orf48Q96LS8 159 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 PRELID3AQ96N28 172 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 PYGO1Q9Y3Y4 419 aa7.48□□□□□ -1.21
VRK1-204ENST00000555351 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
VRK1-204ENST00000555351 MAJINQ3KP22 176 aa7.47□□□□□ -1.21
VRK1-204ENST00000555351 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 A0A096LNI7 61 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 IGKV2-24A0A0C4DH68 120 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 K7EMI3 77 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 RAB5AP20339 215 aa7.46□□□□□ -1.22
VRK1-204ENST00000555351 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.22
VRK1-204ENST00000555351 STPG4Q8N801 248 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms