RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
MARK3-209ENST00000555235 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
MARK3-209ENST00000555235 HTN1P15515 57 aa11.59□□□□□ -0.55
MARK3-209ENST00000555235 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
MARK3-209ENST00000555235 C3orf22Q8N5N4 141 aa11.59□□□□□ -0.55
MARK3-209ENST00000555235 Q9H8V8 135 aa11.59□□□□□ -0.55
MARK3-209ENST00000555235 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.55
MARK3-209ENST00000555235 UQCRQO14949 82 aa11.58□□□□□ -0.55
MARK3-209ENST00000555235 HERVK_113P63121 156 aa11.58□□□□□ -0.55
MARK3-209ENST00000555235 SMCR5Q8TEV8 140 aa11.58□□□□□ -0.55
MARK3-209ENST00000555235 CXCL5P42830 114 aa11.58□□□□□ -0.56
MARK3-209ENST00000555235 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
MARK3-209ENST00000555235 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.56
MARK3-209ENST00000555235 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
MARK3-209ENST00000555235 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
MARK3-209ENST00000555235 PEMTQ9UBM1 199 aa11.58□□□□□ -0.56
MARK3-209ENST00000555235 KNCNA6PVL3 124 aa11.57□□□□□ -0.56
MARK3-209ENST00000555235 ZNF415Q09FC8 603 aa11.57□□□□□ -0.56
MARK3-209ENST00000555235 DGAT2L7PQ6IED9 249 aa11.57□□□□□ -0.56
MARK3-209ENST00000555235 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 BEAN1Q3B7T3 259 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 FAM222AQ5U5X8 452 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 Q9UF83 564 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 Q6ZSN1 163 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
MARK3-209ENST00000555235 C3orf56Q8N813 242 aa11.56□□□□□ -0.56
MARK3-209ENST00000555235 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
MARK3-209ENST00000555235 NDUFA7O95182 113 aa11.55□□□□□ -0.56
MARK3-209ENST00000555235 HOXD3P31249 432 aaPredicted RBP11.55□□□□□ -0.56
MARK3-209ENST00000555235 VPREB3Q9UKI3 123 aa11.55□□□□□ -0.56
MARK3-209ENST00000555235 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
MARK3-209ENST00000555235 PPDPFQ9H3Y8 114 aa11.55□□□□□ -0.56
MARK3-209ENST00000555235 USP9XQ93008 2570 aaPredicted RBP11.54□□□□□ -0.56
MARK3-209ENST00000555235 IGHV3-38A0A0C4DH36 116 aa11.54□□□□□ -0.56
MARK3-209ENST00000555235 A8MTW9 85 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 COX6A2Q02221 97 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 Q8N2B8 174 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.53□□□□□ -0.56
MARK3-209ENST00000555235 SOSTDC1Q6X4U4 206 aa11.53□□□□□ -0.56
MARK3-209ENST00000555235 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
MARK3-209ENST00000555235 LRRK2Q5S007 2527 aa11.52□□□□□ -0.56
MARK3-209ENST00000555235 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.56
MARK3-209ENST00000555235 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
MARK3-209ENST00000555235 DSCR9P59020 149 aa11.52□□□□□ -0.57
MARK3-209ENST00000555235 LINC01356Q8N9X3 169 aa11.52□□□□□ -0.57
MARK3-209ENST00000555235 SORL1Q92673 2214 aa11.52□□□□□ -0.57
MARK3-209ENST00000555235 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
MARK3-209ENST00000555235 PLA2G2AP14555 144 aa11.51□□□□□ -0.57
MARK3-209ENST00000555235 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
MARK3-209ENST00000555235 HELZ2Q9BYK8 2649 aaKnown RBP11.51□□□□□ -0.57
MARK3-209ENST00000555235 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
MARK3-209ENST00000555235 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
MARK3-209ENST00000555235 PF4P02776 101 aa11.51□□□□□ -0.57
MARK3-209ENST00000555235 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
MARK3-209ENST00000555235 DEFB131AP59861 70 aa11.51□□□□□ -0.57
MARK3-209ENST00000555235 CELSR2Q9HCU4 2923 aa11.5□□□□□ -0.57
MARK3-209ENST00000555235 CSPG4Q6UVK1 2322 aa11.5□□□□□ -0.57
MARK3-209ENST00000555235 PRM2P04554 102 aa11.5□□□□□ -0.57
MARK3-209ENST00000555235 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
MARK3-209ENST00000555235 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
MARK3-209ENST00000555235 TENM4Q6N022 2769 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 J3QKU1 62 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 HIST2H2BCQ6DN03 193 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 HIST2H2BDQ6DRA6 164 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 C22orf24Q9Y442 160 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 LINC00694P0DN24 101 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 COX7CP15954 63 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 UTP20O75691 2785 aaKnown RBP11.49□□□□□ -0.57
MARK3-209ENST00000555235 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
MARK3-209ENST00000555235 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 A0A096LNT2 108 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 J3QLI3 93 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 RS1O15537 224 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 NRGNQ92686 78 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 FAM218AQ96MZ4 157 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 OVOL2Q9BRP0 275 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 CSDC2Q9Y534 153 aaKnown RBP11.48□□□□□ -0.57
MARK3-209ENST00000555235 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
MARK3-209ENST00000555235 ATOX1O00244 68 aa11.47□□□□□ -0.57
MARK3-209ENST00000555235 MALP21145 153 aa11.47□□□□□ -0.57
MARK3-209ENST00000555235 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
MARK3-209ENST00000555235 SLURP1P55000 103 aa11.47□□□□□ -0.57
MARK3-209ENST00000555235 CRYBG3Q68DQ2 2970 aa11.47□□□□□ -0.57
MARK3-209ENST00000555235 HIST1H4AP62805 103 aaKnown RBP11.46□□□□□ -0.57
MARK3-209ENST00000555235 Q6YL49 198 aa11.46□□□□□ -0.58
MARK3-209ENST00000555235 C18orf65Q6ZTR6 163 aa11.46□□□□□ -0.58
MARK3-209ENST00000555235 FASNP49327 2511 aaKnown RBP11.45□□□□□ -0.58
MARK3-209ENST00000555235 A0A1B0GX51 115 aa11.45□□□□□ -0.58
MARK3-209ENST00000555235 CRPP02741 224 aa11.45□□□□□ -0.58
MARK3-209ENST00000555235 CRYGAP11844 174 aa11.45□□□□□ -0.58
MARK3-209ENST00000555235 LRRC75A-AS1Q8N1F1 130 aa11.45□□□□□ -0.58
MARK3-209ENST00000555235 GCN1Q92616 2671 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms