RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TMED4Q7Z7H5 227 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 LYG2Q86SG7 212 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 COA5Q86WW8 74 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 STX12Q86Y82 276 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 C12orf45Q8N5I9 185 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 MYOZ3Q8TDC0 251 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 DYNLRB2Q8TF09 96 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 FUT9Q9Y231 359 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 SOX21Q9Y651 276 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 TNCP24821 2201 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 TRAV2A0A0B4J234 112 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 IGLC7A0M8Q6 106 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 C9orf170A2RU37 121 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 OR4C46A6NHA9 309 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 IL7P13232 177 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 CBLN1P23435 193 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 S100A11P31949 105 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 SNRPD3P62318 126 aaKnown RBP1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 ZNF431Q8TF32 576 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 C2orf50Q96LR7 162 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 TP53RKQ96S44 253 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 HSPB9Q9BQS6 159 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 FAM103A1Q9BTL3 118 aaKnown RBP1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 NPVFQ9HCQ7 196 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 GSKIPQ9P0R6 139 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 V9GYH0 126 aa1.97□□□□□ -2.09
CKS1BP1-201ENST00000555221 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 TRBV20OR9-2A0A075B6H5 130 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 C17orf112F2Z3M2 114 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 HLA-DMBP28068 263 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 SULT1A1P50225 295 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 B2MP61769 119 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 EIF5AP63241 154 aaKnown RBP1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 WT1-ASQ06250 92 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 RGS21Q2M5E4 152 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 IAH1Q2TAA2 248 aaPredicted RBP1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 PPP1R14BQ96C90 147 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 GPR146Q96CH1 333 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 PFDN5Q99471 154 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 TRGV9Q99603 122 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 NMES1Q9C002 83 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 FXYD6Q9H0Q3 95 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 PSENENQ9NZ42 101 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 RABAC1Q9UI14 185 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 PAIP2BQ9ULR5 123 aaKnown RBP1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 DNAH1Q9P2D7 4330 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 SACSQ9NZJ4 4579 aa1.96□□□□□ -2.1
CKS1BP1-201ENST00000555221 TRAV3A0A0B4J244 114 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 OR2T8A6NH00 312 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 C2orf70A6NJV1 201 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 F8W036 122 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 I3L2K1 104 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 PITX3O75364 302 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 HYPMO75409 117 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 IGKV1-5P01602 117 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 IGLV1-51P01701 117 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 PPBPP02775 128 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 APELAP0DMC3 54 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 RPL7P18124 248 aaKnown RBP1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 CEBPGP53567 150 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 SUPT4H1P63272 117 aaKnown RBP1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 GUK1Q16774 197 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 DEFB114Q30KQ6 69 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 SPANXN5Q5MJ07 72 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 FAM74A1Q5RGS3 127 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 EIF5AL1Q6IS14 154 aaKnown RBP1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 OR8I2Q8N0Y5 310 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 PBDC1Q9BVG4 233 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 TMEM147Q9BVK8 224 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 RHPN1-AS1Q9BWJ2 59 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 PARD6GQ9BYG4 376 aaPredicted RBP1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 CST9LQ9H4G1 147 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 UQCC1Q9NVA1 299 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 IL36BQ9NZH7 164 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 SMPXQ9UHP9 88 aa1.95□□□□□ -2.1
CKS1BP1-201ENST00000555221 TRRAPQ9Y4A5 3859 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 BORCS7-ASMTA0A0B4J1R7 106 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 E7EUB6 86 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 K7EIM0 57 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 PRH1P02810 166 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 SERF2P84101 59 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 PSG9Q00887 426 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 DEFB136Q30KP8 78 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 C10orf55Q5SWW7 151 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 TOMM20LQ6UXN7 152 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 BPIFA4PQ86YQ2 179 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 RPRMQ9NS64 109 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 LYRM2Q9NU23 88 aaPredicted RBP1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 HIGD1AQ9Y241 93 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
CKS1BP1-201ENST00000555221 TGIF2-C20orf24A0A0A6YYL0 155 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 A0A0D9SG52 128 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 TMEM189A5PLL7 270 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 SMIM9A6NGZ8 99 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 PPP5D1E7EU14 171 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 SSSCA1O60232 199 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 PRM2P04554 102 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 IGLC1P0CG04 106 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 IAPPP10997 89 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms