RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 TSHBP01222 138 aa13.75□□□□□ -0.21
RCCD1-202ENST00000554302 PMCHP20382 165 aa13.75□□□□□ -0.21
RCCD1-202ENST00000554302 ALKAL2Q6UX46 152 aa13.74□□□□□ -0.21
RCCD1-202ENST00000554302 C7orf33Q8WU49 177 aa13.74□□□□□ -0.21
RCCD1-202ENST00000554302 LINC00959A0A1B0GUT2 108 aa13.73□□□□□ -0.21
RCCD1-202ENST00000554302 POLR2KP53803 58 aaKnown RBP13.73□□□□□ -0.21
RCCD1-202ENST00000554302 MAJINQ3KP22 176 aa13.73□□□□□ -0.21
RCCD1-202ENST00000554302 BTF3L4Q96K17 158 aa13.73□□□□□ -0.21
RCCD1-202ENST00000554302 TMEM191AQ9H0A3 160 aa13.73□□□□□ -0.21
RCCD1-202ENST00000554302 MRPL52Q86TS9 123 aaKnown RBP13.72□□□□□ -0.21
RCCD1-202ENST00000554302 ST20Q9HBF5 79 aa13.72□□□□□ -0.21
RCCD1-202ENST00000554302 A0A096LNI7 61 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 CCL25O15444 150 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 XCL1P47992 114 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 LINC01551Q86U37 167 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 TSKUQ8WUA8 353 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 TMEM101Q96IK0 257 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 TMEM242Q9NWH2 141 aa13.71□□□□□ -0.21
RCCD1-202ENST00000554302 TRBV27A0A0K0K1C4 114 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 HIGD1CA8MV81 97 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 RAB4AP20338 218 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 STPG4Q8N801 248 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 BORCS7Q96B45 105 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 MRAP2Q96G30 205 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 CDC42SE2Q9NRR3 84 aa13.7□□□□□ -0.22
RCCD1-202ENST00000554302 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
RCCD1-202ENST00000554302 CEBPGP53567 150 aa13.69□□□□□ -0.22
RCCD1-202ENST00000554302 AKAP14Q86UN6 197 aa13.69□□□□□ -0.22
RCCD1-202ENST00000554302 PRR3P79522 188 aaKnown RBP13.68□□□□□ -0.22
RCCD1-202ENST00000554302 SMIM7Q9BQ49 75 aa13.68□□□□□ -0.22
RCCD1-202ENST00000554302 OSTCQ9NRP0 149 aa13.68□□□□□ -0.22
RCCD1-202ENST00000554302 CD164L2Q6UWJ8 174 aa13.67□□□□□ -0.22
RCCD1-202ENST00000554302 LINC00474Q9P2X8 69 aa13.67□□□□□ -0.22
RCCD1-202ENST00000554302 SS18Q15532 418 aa13.66□□□□□ -0.22
RCCD1-202ENST00000554302 AMN1Q8IY45 258 aa13.66□□□□□ -0.22
RCCD1-202ENST00000554302 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
RCCD1-202ENST00000554302 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
RCCD1-202ENST00000554302 C7orf77A4D0Y5 90 aa13.65□□□□□ -0.22
RCCD1-202ENST00000554302 CARD19Q96LW7 228 aa13.65□□□□□ -0.22
RCCD1-202ENST00000554302 LINC01600Q96MT4 127 aa13.65□□□□□ -0.22
RCCD1-202ENST00000554302 EIF5A2Q9GZV4 153 aaKnown RBP13.65□□□□□ -0.22
RCCD1-202ENST00000554302 PKIGQ9Y2B9 76 aa13.65□□□□□ -0.22
RCCD1-202ENST00000554302 SRP19P09132 144 aaKnown RBP13.64□□□□□ -0.23
RCCD1-202ENST00000554302 V9GYV3 84 aa13.64□□□□□ -0.23
RCCD1-202ENST00000554302 LRP2P98164 4655 aa13.63□□□□□ -0.23
RCCD1-202ENST00000554302 ZNF727A8MUV8 499 aa13.63□□□□□ -0.23
RCCD1-202ENST00000554302 CSDC2Q9Y534 153 aaKnown RBP13.63□□□□□ -0.23
RCCD1-202ENST00000554302 VCYO14598 125 aa13.62□□□□□ -0.23
RCCD1-202ENST00000554302 NRACQ8N912 160 aa13.62□□□□□ -0.23
RCCD1-202ENST00000554302 NUP35Q8NFH5 326 aa13.62□□□□□ -0.23
RCCD1-202ENST00000554302 SMKR1H3BMG3 65 aa13.61□□□□□ -0.23
RCCD1-202ENST00000554302 SYCNQ0VAF6 134 aa13.61□□□□□ -0.23
RCCD1-202ENST00000554302 ZNF561-AS1K7EIQ3 104 aa13.6□□□□□ -0.23
RCCD1-202ENST00000554302 RIGQ13278 110 aa13.6□□□□□ -0.23
RCCD1-202ENST00000554302 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
RCCD1-202ENST00000554302 C1orf196B1AJZ1 125 aa13.59□□□□□ -0.23
RCCD1-202ENST00000554302 PPP1R17O96001 155 aa13.59□□□□□ -0.23
RCCD1-202ENST00000554302 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
RCCD1-202ENST00000554302 ISOC2Q96AB3 205 aa13.59□□□□□ -0.23
RCCD1-202ENST00000554302 CAMPP49913 170 aa13.58□□□□□ -0.24
RCCD1-202ENST00000554302 SPINK6Q6UWN8 80 aa13.58□□□□□ -0.24
RCCD1-202ENST00000554302 FCER1GP30273 86 aa13.57□□□□□ -0.24
RCCD1-202ENST00000554302 PTTG1IPP53801 180 aa13.57□□□□□ -0.24
RCCD1-202ENST00000554302 SRSF9Q13242 221 aaKnown RBP eCLIP13.57□□□□□ -0.24
RCCD1-202ENST00000554302 hCG_2014768A0A024R1R8 64 aa13.56□□□□□ -0.24
RCCD1-202ENST00000554302 IGLV4-69A0A075B6H9 119 aa13.56□□□□□ -0.24
RCCD1-202ENST00000554302 SMAGPQ0VAQ4 97 aa13.56□□□□□ -0.24
RCCD1-202ENST00000554302 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
RCCD1-202ENST00000554302 A0A0J9YXV3 536 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 COX7A2LO14548 114 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 RPL23P62829 140 aaKnown RBP13.55□□□□□ -0.24
RCCD1-202ENST00000554302 TMEM241Q24JQ0 296 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 MRPL51Q4U2R6 128 aaKnown RBP13.55□□□□□ -0.24
RCCD1-202ENST00000554302 FAM74A3Q4VXF1 159 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 FAM104BQ5XKR9 115 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 Q6ZRP5 223 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 KIR2DL4Q99706 377 aa13.55□□□□□ -0.24
RCCD1-202ENST00000554302 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
RCCD1-202ENST00000554302 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
RCCD1-202ENST00000554302 KRTAP10-8P60410 259 aa13.54□□□□□ -0.24
RCCD1-202ENST00000554302 TIMM21Q9BVV7 248 aa13.54□□□□□ -0.24
RCCD1-202ENST00000554302 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
RCCD1-202ENST00000554302 MALP21145 153 aa13.53□□□□□ -0.24
RCCD1-202ENST00000554302 RNASE13Q5GAN3 156 aaKnown RBP13.53□□□□□ -0.24
RCCD1-202ENST00000554302 C2orf48Q96LS8 159 aa13.53□□□□□ -0.24
RCCD1-202ENST00000554302 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.25
RCCD1-202ENST00000554302 LINC00862A6NCI5 91 aa13.52□□□□□ -0.25
RCCD1-202ENST00000554302 RPL32P62910 135 aaKnown RBP13.52□□□□□ -0.25
RCCD1-202ENST00000554302 Q6ZUT4 128 aa13.52□□□□□ -0.25
RCCD1-202ENST00000554302 C20orf78Q9BR46 151 aa13.52□□□□□ -0.25
RCCD1-202ENST00000554302 TRAV13-1A0A0B4J241 112 aa13.51□□□□□ -0.25
RCCD1-202ENST00000554302 A0A1W2PNN7 141 aa13.51□□□□□ -0.25
RCCD1-202ENST00000554302 C21orf62-AS1Q17RA5 79 aa13.51□□□□□ -0.25
RCCD1-202ENST00000554302 REG3GQ6UW15 175 aa13.51□□□□□ -0.25
RCCD1-202ENST00000554302 C9JQL5 133 aa13.5□□□□□ -0.25
RCCD1-202ENST00000554302 APOMO95445 188 aa13.5□□□□□ -0.25
RCCD1-202ENST00000554302 GAGE2BQ13066 116 aa13.5□□□□□ -0.25
RCCD1-202ENST00000554302 ODF1Q14990 250 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms