RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 STPG4Q8N801 248 aa11.83□□□□□ -0.52
CPSF2-203ENST00000554290 TMEM242Q9NWH2 141 aa11.83□□□□□ -0.52
CPSF2-203ENST00000554290 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
CPSF2-203ENST00000554290 HIGD1CA8MV81 97 aa11.82□□□□□ -0.52
CPSF2-203ENST00000554290 MRPL52Q86TS9 123 aaKnown RBP11.82□□□□□ -0.52
CPSF2-203ENST00000554290 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
CPSF2-203ENST00000554290 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
CPSF2-203ENST00000554290 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
CPSF2-203ENST00000554290 GAS8-AS1O95177 125 aa11.81□□□□□ -0.52
CPSF2-203ENST00000554290 POLR2KP53803 58 aaKnown RBP11.81□□□□□ -0.52
CPSF2-203ENST00000554290 OSTCQ9NRP0 149 aa11.81□□□□□ -0.52
CPSF2-203ENST00000554290 A0A096LNI7 61 aa11.8□□□□□ -0.52
CPSF2-203ENST00000554290 RAB4AP20338 218 aa11.8□□□□□ -0.52
CPSF2-203ENST00000554290 CDC42SE2Q9NRR3 84 aa11.8□□□□□ -0.52
CPSF2-203ENST00000554290 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 HMCN2Q8NDA2 5059 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 C7orf77A4D0Y5 90 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 ZNF727A8MUV8 499 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 CD164L2Q6UWJ8 174 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 ZNF664Q8N3J9 261 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
CPSF2-203ENST00000554290 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
CPSF2-203ENST00000554290 VCYO14598 125 aa11.78□□□□□ -0.52
CPSF2-203ENST00000554290 PPP1R17O96001 155 aa11.78□□□□□ -0.52
CPSF2-203ENST00000554290 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
CPSF2-203ENST00000554290 FCER1GP30273 86 aa11.77□□□□□ -0.53
CPSF2-203ENST00000554290 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
CPSF2-203ENST00000554290 SMAGPQ0VAQ4 97 aa11.77□□□□□ -0.53
CPSF2-203ENST00000554290 RIGQ13278 110 aa11.77□□□□□ -0.53
CPSF2-203ENST00000554290 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.53
CPSF2-203ENST00000554290 hCG_2014768A0A024R1R8 64 aa11.76□□□□□ -0.53
CPSF2-203ENST00000554290 SYCNQ0VAF6 134 aa11.76□□□□□ -0.53
CPSF2-203ENST00000554290 C1orf196B1AJZ1 125 aa11.75□□□□□ -0.53
CPSF2-203ENST00000554290 SRP19P09132 144 aaKnown RBP11.75□□□□□ -0.53
CPSF2-203ENST00000554290 ISOC2Q96AB3 205 aa11.75□□□□□ -0.53
CPSF2-203ENST00000554290 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
CPSF2-203ENST00000554290 MALP21145 153 aa11.74□□□□□ -0.53
CPSF2-203ENST00000554290 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
CPSF2-203ENST00000554290 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
CPSF2-203ENST00000554290 V9GYV3 84 aa11.74□□□□□ -0.53
CPSF2-203ENST00000554290 SMKR1H3BMG3 65 aa11.73□□□□□ -0.53
CPSF2-203ENST00000554290 CAMPP49913 170 aa11.73□□□□□ -0.53
CPSF2-203ENST00000554290 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
CPSF2-203ENST00000554290 TMEM241Q24JQ0 296 aa11.73□□□□□ -0.53
CPSF2-203ENST00000554290 LINC01600Q96MT4 127 aa11.73□□□□□ -0.53
CPSF2-203ENST00000554290 COX7A2LO14548 114 aa11.72□□□□□ -0.53
CPSF2-203ENST00000554290 PPP1R2P9O14990 202 aa11.72□□□□□ -0.53
CPSF2-203ENST00000554290 FAM74A3Q4VXF1 159 aa11.72□□□□□ -0.53
CPSF2-203ENST00000554290 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
CPSF2-203ENST00000554290 NRACQ8N912 160 aa11.71□□□□□ -0.53
CPSF2-203ENST00000554290 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.53
CPSF2-203ENST00000554290 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
CPSF2-203ENST00000554290 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
CPSF2-203ENST00000554290 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
CPSF2-203ENST00000554290 Q6ZRP5 223 aa11.7□□□□□ -0.54
CPSF2-203ENST00000554290 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
CPSF2-203ENST00000554290 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
CPSF2-203ENST00000554290 REG3GQ6UW15 175 aa11.69□□□□□ -0.54
CPSF2-203ENST00000554290 TRAV13-1A0A0B4J241 112 aa11.68□□□□□ -0.54
CPSF2-203ENST00000554290 LINC00862A6NCI5 91 aa11.68□□□□□ -0.54
CPSF2-203ENST00000554290 RPL23P62829 140 aaKnown RBP11.68□□□□□ -0.54
CPSF2-203ENST00000554290 FAM104BQ5XKR9 115 aa11.68□□□□□ -0.54
CPSF2-203ENST00000554290 CAMK2N2Q96S95 79 aa11.68□□□□□ -0.54
CPSF2-203ENST00000554290 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
CPSF2-203ENST00000554290 A0A1B0GW15 77 aa11.67□□□□□ -0.54
CPSF2-203ENST00000554290 TCAPO15273 167 aa11.67□□□□□ -0.54
CPSF2-203ENST00000554290 APOMO95445 188 aa11.67□□□□□ -0.54
CPSF2-203ENST00000554290 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
CPSF2-203ENST00000554290 ADIRFQ15847 76 aa11.67□□□□□ -0.54
CPSF2-203ENST00000554290 MRPL51Q4U2R6 128 aaKnown RBP11.67□□□□□ -0.54
CPSF2-203ENST00000554290 RNASE13Q5GAN3 156 aaKnown RBP11.67□□□□□ -0.54
CPSF2-203ENST00000554290 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
CPSF2-203ENST00000554290 CKS2P33552 79 aa11.66□□□□□ -0.54
CPSF2-203ENST00000554290 C2orf48Q96LS8 159 aa11.66□□□□□ -0.54
CPSF2-203ENST00000554290 NAT8Q9UHE5 227 aa11.66□□□□□ -0.54
CPSF2-203ENST00000554290 UBR4Q5T4S7 5183 aa11.65□□□□□ -0.54
CPSF2-203ENST00000554290 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
CPSF2-203ENST00000554290 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
CPSF2-203ENST00000554290 Q6ZUT4 128 aa11.65□□□□□ -0.54
CPSF2-203ENST00000554290 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
CPSF2-203ENST00000554290 TRBV24-1A0A075B6N3 115 aa11.64□□□□□ -0.55
CPSF2-203ENST00000554290 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
CPSF2-203ENST00000554290 SRSF9Q13242 221 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPSF2-203ENST00000554290 S100A8P05109 93 aa11.62□□□□□ -0.55
CPSF2-203ENST00000554290 PEA15Q15121 130 aa11.62□□□□□ -0.55
CPSF2-203ENST00000554290 A0A1W2PNN7 141 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 F8W036 122 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
CPSF2-203ENST00000554290 SPAG11BQ08648 103 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 RNF151Q2KHN1 245 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 OR10D4PQ8NGN7 298 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 SPANXA1Q9NS26 97 aa11.61□□□□□ -0.55
CPSF2-203ENST00000554290 C9JQL5 133 aa11.6□□□□□ -0.55
CPSF2-203ENST00000554290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
CPSF2-203ENST00000554290 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
CPSF2-203ENST00000554290 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
CPSF2-203ENST00000554290 SMDT1Q9H4I9 107 aa11.6□□□□□ -0.55
CPSF2-203ENST00000554290 F8WDY8 70 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms