RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 APOMO95445 188 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 XCL1P47992 114 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 SUMO2P61956 95 aaKnown RBP4.17□□□□□ -1.74
FOXN3-205ENST00000553904 CIRBPQ14011 172 aaKnown RBP4.17□□□□□ -1.74
FOXN3-205ENST00000553904 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 C20orf78Q9BR46 151 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 CDC42SE2Q9NRR3 84 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-205ENST00000553904 V9GYV3 84 aa4.17□□□□□ -1.74
FOXN3-205ENST00000553904 SMIM27A0A1W2PRY6 76 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 TSHBP01222 138 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 PPBPP02775 128 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 SLPIP03973 132 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 CKS2P33552 79 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 RPL23P62829 140 aaKnown RBP4.16□□□□□ -1.74
FOXN3-205ENST00000553904 COX6A2Q02221 97 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 FOXI1Q12951 378 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 ADIRFQ15847 76 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 MAJINQ3KP22 176 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 HIGD2BQ4VC39 106 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 FAM104BQ5XKR9 115 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 C15orf56Q8N910 161 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 SPACA4Q8TDM5 124 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 TMEM242Q9NWH2 141 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
FOXN3-205ENST00000553904 HSPG2P98160 4391 aa4.15□□□□□ -1.74
FOXN3-205ENST00000553904 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.74
FOXN3-205ENST00000553904 TRBV24-1A0A075B6N3 115 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 COX7A2LO14548 114 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 RAB5AP20339 215 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 CAMPP49913 170 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.75
FOXN3-205ENST00000553904 RPL32P62910 135 aaKnown RBP4.15□□□□□ -1.75
FOXN3-205ENST00000553904 STPG4Q8N801 248 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 PRSS3P2Q8NHM4 247 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 TIMM21Q9BVV7 248 aa4.15□□□□□ -1.75
FOXN3-205ENST00000553904 IGKV2-24A0A0C4DH68 120 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 F8WDY8 70 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 PHOX2AO14813 284 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 RAB14P61106 215 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 SYCNQ0VAF6 134 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 MRPL51Q4U2R6 128 aaKnown RBP4.14□□□□□ -1.75
FOXN3-205ENST00000553904 CARD19Q96LW7 228 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 UBE2D4Q9Y2X8 147 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
FOXN3-205ENST00000553904 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 TRAV13-1A0A0B4J241 112 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 LOC107984640A0A0U1RRK4 108 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 PANO1I0J062 215 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 GAS8-AS1O95177 125 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 TNFRSF6BO95407 300 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 CHTF8P0CG12 524 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 HBBP68871 147 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 NRACQ8N912 160 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 C2orf48Q96LS8 159 aa4.13□□□□□ -1.75
FOXN3-205ENST00000553904 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 SMKR1H3BMG3 65 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 G0S2P27469 103 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
FOXN3-205ENST00000553904 Q6ZRP5 223 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 TMEM136Q6ZRR5 245 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 ATP5L2Q7Z4Y8 100 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 ORMDL3Q8N138 153 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 ANAPC16Q96DE5 110 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 CAMK2N2Q96S95 79 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 IMMP2LQ96T52 175 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 SPANXA1Q9NS26 97 aa4.12□□□□□ -1.75
FOXN3-205ENST00000553904 RYR1P21817 5038 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 A0A096LNI7 61 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 D6R8Y8 96 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 MT-ND4LP03901 98 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 IFI27P40305 119 aaPredicted RBP4.11□□□□□ -1.75
FOXN3-205ENST00000553904 MRPS36P82909 103 aaKnown RBP4.11□□□□□ -1.75
FOXN3-205ENST00000553904 GAGE2BQ13066 116 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 RNF151Q2KHN1 245 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 MRPL54Q6P161 138 aaKnown RBP4.11□□□□□ -1.75
FOXN3-205ENST00000553904 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 SPINK6Q6UWN8 80 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 C5orf38Q86SI9 138 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 SMIM2Q9BVW6 85 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 PLA2G2DQ9UNK4 145 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 LAMTOR2Q9Y2Q5 125 aa4.11□□□□□ -1.75
FOXN3-205ENST00000553904 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 TGIF2-C20orf24A0A0A6YYL0 155 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 A0A1B0GVG6 124 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 PRSS47A8MTI9 375 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 C9JQL5 133 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 K7EMI3 77 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 PTTG1IPP53801 180 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 SRSF3P84103 164 aaKnown RBP4.1□□□□□ -1.75
FOXN3-205ENST00000553904 LINC00526Q96FQ7 95 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 PRELID3AQ96N28 172 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
FOXN3-205ENST00000553904 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
FOXN3-205ENST00000553904 A0A1B0GXF2 115 aa4.09□□□□□ -1.75
FOXN3-205ENST00000553904 NDUFA1O15239 70 aa4.09□□□□□ -1.75
FOXN3-205ENST00000553904 HNRNPA3P51991 378 aaKnown RBP4.09□□□□□ -1.75
FOXN3-205ENST00000553904 SPAG11BQ08648 103 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms