RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 TRBV27A0A0K0K1C4 114 aa11.38□□□□□ -0.59
FOXN3-204ENST00000553840 GAS8-AS1O95177 125 aa11.38□□□□□ -0.59
FOXN3-204ENST00000553840 TSHBP01222 138 aa11.38□□□□□ -0.59
FOXN3-204ENST00000553840 MT-ND4LP03901 98 aa11.38□□□□□ -0.59
FOXN3-204ENST00000553840 ESDP10768 282 aa11.38□□□□□ -0.59
FOXN3-204ENST00000553840 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
FOXN3-204ENST00000553840 NDUFA5Q16718 116 aa11.38□□□□□ -0.59
FOXN3-204ENST00000553840 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.38□□□□□ -0.59
FOXN3-204ENST00000553840 VCYO14598 125 aa11.37□□□□□ -0.59
FOXN3-204ENST00000553840 FCER1GP30273 86 aa11.37□□□□□ -0.59
FOXN3-204ENST00000553840 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
FOXN3-204ENST00000553840 RPL37AP61513 92 aaKnown RBP11.37□□□□□ -0.59
FOXN3-204ENST00000553840 SMAGPQ0VAQ4 97 aa11.37□□□□□ -0.59
FOXN3-204ENST00000553840 C7orf77A4D0Y5 90 aa11.36□□□□□ -0.59
FOXN3-204ENST00000553840 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
FOXN3-204ENST00000553840 ANAPC16Q96DE5 110 aa11.36□□□□□ -0.59
FOXN3-204ENST00000553840 SEC11CQ9BY50 192 aa11.36□□□□□ -0.59
FOXN3-204ENST00000553840 KRTAP29-1A8MX34 341 aaPredicted RBP11.35□□□□□ -0.59
FOXN3-204ENST00000553840 SS18Q15532 418 aa11.35□□□□□ -0.59
FOXN3-204ENST00000553840 A0A1B0GW15 77 aa11.34□□□□□ -0.59
FOXN3-204ENST00000553840 SLPIP03973 132 aa11.34□□□□□ -0.59
FOXN3-204ENST00000553840 CAMPP49913 170 aa11.34□□□□□ -0.59
FOXN3-204ENST00000553840 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
FOXN3-204ENST00000553840 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
FOXN3-204ENST00000553840 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
FOXN3-204ENST00000553840 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
FOXN3-204ENST00000553840 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
FOXN3-204ENST00000553840 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
FOXN3-204ENST00000553840 SMKR1H3BMG3 65 aa11.33□□□□□ -0.6
FOXN3-204ENST00000553840 S100A8P05109 93 aa11.33□□□□□ -0.6
FOXN3-204ENST00000553840 XCL1P47992 114 aa11.33□□□□□ -0.6
FOXN3-204ENST00000553840 KRTAP10-4P60372 401 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-204ENST00000553840 FAM104BQ5XKR9 115 aa11.33□□□□□ -0.6
FOXN3-204ENST00000553840 ZNF664Q8N3J9 261 aa11.33□□□□□ -0.6
FOXN3-204ENST00000553840 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-204ENST00000553840 PANO1I0J062 215 aa11.32□□□□□ -0.6
FOXN3-204ENST00000553840 CCL25O15444 150 aa11.32□□□□□ -0.6
FOXN3-204ENST00000553840 FOXI1Q12951 378 aa11.32□□□□□ -0.6
FOXN3-204ENST00000553840 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
FOXN3-204ENST00000553840 CDC42SE2Q9NRR3 84 aa11.32□□□□□ -0.6
FOXN3-204ENST00000553840 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
FOXN3-204ENST00000553840 NRACQ8N912 160 aa11.31□□□□□ -0.6
FOXN3-204ENST00000553840 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
FOXN3-204ENST00000553840 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
FOXN3-204ENST00000553840 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 TCAPO15273 167 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 OXTP01178 125 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 CKS2P33552 79 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 HBBP68871 147 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
FOXN3-204ENST00000553840 A0A087WYN8 130 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 COX6A2Q02221 97 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 C10orf91Q5T1B1 145 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 CD164L2Q6UWJ8 174 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 SPACA4Q8TDM5 124 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
FOXN3-204ENST00000553840 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
FOXN3-204ENST00000553840 CSDC2Q9Y534 153 aaKnown RBP11.29□□□□□ -0.6
FOXN3-204ENST00000553840 C1orf196B1AJZ1 125 aa11.28□□□□□ -0.6
FOXN3-204ENST00000553840 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.61
FOXN3-204ENST00000553840 A0A1B0GXF2 115 aa11.27□□□□□ -0.61
FOXN3-204ENST00000553840 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
FOXN3-204ENST00000553840 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
FOXN3-204ENST00000553840 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
FOXN3-204ENST00000553840 MALP21145 153 aa11.26□□□□□ -0.61
FOXN3-204ENST00000553840 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
FOXN3-204ENST00000553840 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
FOXN3-204ENST00000553840 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 APOC3P02656 99 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 MAJINQ3KP22 176 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 IMMP2LQ96T52 175 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
FOXN3-204ENST00000553840 D6R8Y8 96 aa11.24□□□□□ -0.61
FOXN3-204ENST00000553840 PPBPP02775 128 aa11.24□□□□□ -0.61
FOXN3-204ENST00000553840 RHEBQ15382 184 aa11.24□□□□□ -0.61
FOXN3-204ENST00000553840 CARD19Q96LW7 228 aa11.24□□□□□ -0.61
FOXN3-204ENST00000553840 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
FOXN3-204ENST00000553840 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
FOXN3-204ENST00000553840 HERC1Q15751 4861 aa11.23□□□□□ -0.61
FOXN3-204ENST00000553840 COX7A2LO14548 114 aa11.23□□□□□ -0.61
FOXN3-204ENST00000553840 S100PP25815 95 aa11.23□□□□□ -0.61
FOXN3-204ENST00000553840 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
FOXN3-204ENST00000553840 PHOX2AO14813 284 aa11.22□□□□□ -0.61
FOXN3-204ENST00000553840 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
FOXN3-204ENST00000553840 SLC7A5P1Q8MH63 180 aa11.22□□□□□ -0.61
FOXN3-204ENST00000553840 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
FOXN3-204ENST00000553840 APOMO95445 188 aa11.21□□□□□ -0.61
FOXN3-204ENST00000553840 RNASE13Q5GAN3 156 aaKnown RBP11.21□□□□□ -0.61
FOXN3-204ENST00000553840 SVBPQ8N300 66 aa11.21□□□□□ -0.61
FOXN3-204ENST00000553840 STPG4Q8N801 248 aa11.21□□□□□ -0.61
FOXN3-204ENST00000553840 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
FOXN3-204ENST00000553840 A0A096LNI7 61 aa11.2□□□□□ -0.62
FOXN3-204ENST00000553840 ATP6V1G1O75348 118 aa11.2□□□□□ -0.62
FOXN3-204ENST00000553840 SNAPINO95295 136 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms