RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	NDUFAF8	A1L188	74 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	FAM74A4	Q5TZK3	123 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483		Q8N3U1	123 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	FAM215A	Q9Y5M1	114 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	PLXNA3	P51805	1871 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGHV3-15	A0A0B4J1V0	119 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	CASC10	Q5T4H9	136 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483		Q6YL49	198 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	MIR7-3HG	Q8N6C7	128 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	CD163L1	Q9NR16	1453 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	LY75	O60449	1722 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	NRXN3	Q9Y4C0	1643 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGHV3OR16-8	A0A075B7F1	116 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	MGP	P08493	103 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	DNAH10OS	P0CZ25	163 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	RNASE3	P12724	160 aa	Known RBP	2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	TMEM14C	Q9P0S9	112 aa		2.61	□□□□□ -1.99
CNOT2-231	ENST00000551483	ERCC6L2	Q5T890	1561 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	CXorf51A	A0A1B0GTR3	108 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGLV3-19	P01714	112 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	CLPS	P04118	112 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	C14orf178	Q8N769	122 aa	Predicted RBP	2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	DDX60	Q8IY21	1712 aa	Known RBP	2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGHV3-23	P01764	117 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	MRPS21	P82921	87 aa	Known RBP	2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	C20orf166-AS1	Q96NR2	134 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGKV3D-11	A0A0A0MRZ8	115 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	KRTAP23-1	A1A580	65 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483		H3BPC8	53 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483		Q6ZR54	194 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	LINC00208	Q96KT6	92 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	MRPL36	Q9P0J6	103 aa	Known RBP	2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGLV1-50	A0A075B6I6	118 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGHV1-18	A0A0C4DH31	117 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	COX6B1	P14854	86 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	GAFA1	Q96PS6	74 aa		2.6	□□□□□ -1.99
CNOT2-231	ENST00000551483	COL4A6	Q14031	1691 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	LCE2B	O14633	110 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	PRB3	Q04118	309 aa	Predicted RBP	2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	EIF4EBP1	Q13541	118 aa	Predicted RBP	2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	C10orf25	Q5T742	122 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	ARFGEF3	Q5TH69	2177 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	NDUFB1	O75438	58 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	LINC00167	Q96N53	147 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483	TOGARAM1	Q9Y4F4	1720 aa		2.59	□□□□□ -1.99
CNOT2-231	ENST00000551483		A0A1B0GVX0	72 aa		2.59	□□□□□ -2
CNOT2-231	ENST00000551483	LRRC37A3	O60309	1634 aa		2.59	□□□□□ -2
CNOT2-231	ENST00000551483	LINC01560	Q8TB33	94 aa		2.59	□□□□□ -2
CNOT2-231	ENST00000551483	UNC13C	Q8NB66	2214 aa		2.59	□□□□□ -2
CNOT2-231	ENST00000551483	WFDC10A	Q9H1F0	79 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	MUC22	E2RYF6	1773 aa	Predicted RBP	2.58	□□□□□ -2
CNOT2-231	ENST00000551483	NHS	Q6T4R5	1651 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	ADAMTS7	Q9UKP4	1686 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	ELOF1	P60002	83 aa	Known RBP	2.58	□□□□□ -2
CNOT2-231	ENST00000551483	TNC	P24821	2201 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	IGLV11-55	A0A075B6I3	123 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	IGKV1D-37	A0A075B6S9	117 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	IGKV1OR2-108	A0A075B7D4	117 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	JMJD7-PLA2G4B	H0Y9G9	81 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	CCL22	O00626	93 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	TRBV10-1	A0A0K0K1A3	114 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	NCR3	O14931	201 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	IGLV1-47	P01700	117 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	DEFB112	Q30KQ8	113 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	ZNF833P	Q6ZTB9	187 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	LTBP2	Q14767	1821 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	LTBP1	Q14766	1721 aa		2.58	□□□□□ -2
CNOT2-231	ENST00000551483	RPL36AL	Q969Q0	106 aa	Known RBP	2.57	□□□□□ -2
CNOT2-231	ENST00000551483	C22orf24	Q9Y442	160 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483	RICTOR	Q6R327	1708 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483		A0A1W2PNM2	257 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483	LENEP	Q9Y5L5	61 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483	BRWD3	Q6RI45	1802 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483	MED12	Q93074	2177 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483		A8MUU9	505 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483		P0C880	135 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483	C10orf113	Q5VZT2	155 aa		2.57	□□□□□ -2
CNOT2-231	ENST00000551483	C1orf147	Q96MC9	270 aa	Predicted RBP	2.57	□□□□□ -2
CNOT2-231	ENST00000551483	COL16A1	Q07092	1604 aa	Predicted RBP	2.57	□□□□□ -2
CNOT2-231	ENST00000551483	ERH	P84090	104 aa	Known RBP	2.57	□□□□□ -2
CNOT2-231	ENST00000551483		A0A0J9YX75	114 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	CLPSL1	A2RUU4	121 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	MALRD1	Q5VYJ5	2156 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	SPINT4	Q6UDR6	99 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483		R4GMQ9	66 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	IGIP	A6NJ69	53 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	IGLV1-44	P01699	117 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	COX7B2	Q8TF08	81 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	TIAM2	Q8IVF5	1701 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	KIF26B	Q2KJY2	2108 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	PMS2P5	A8MQ11	134 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	RTL8C	O15255	209 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	LINC00483	Q53H64	154 aa		2.56	□□□□□ -2
CNOT2-231	ENST00000551483	SPINK7	P58062	85 aa		2.55	□□□□□ -2
CNOT2-231	ENST00000551483	TTTY12	Q9BZ98	90 aa		2.55	□□□□□ -2
CNOT2-231	ENST00000551483	COL5A1	P20908	1838 aa	Predicted RBP	2.55	□□□□□ -2
CNOT2-231	ENST00000551483	PDE4DIP	Q5VU43	2346 aa		2.55	□□□□□ -2
CNOT2-231	ENST00000551483	IGLV10-54	A0A075B6I4	117 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms