RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 MALP21145 153 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
RPAP3-207ENST00000551293 NUP35Q8NFH5 326 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 NUDT10Q8NFP7 164 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 ISOC2Q96AB3 205 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 NUDT11Q96G61 164 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 I3L3M4 83 aa11.22□□□□□ -0.61
RPAP3-207ENST00000551293 APOMO95445 188 aa11.22□□□□□ -0.61
RPAP3-207ENST00000551293 KRTAP11-1Q8IUC1 163 aa11.22□□□□□ -0.61
RPAP3-207ENST00000551293 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
RPAP3-207ENST00000551293 A0A087WZ39 114 aa11.21□□□□□ -0.61
RPAP3-207ENST00000551293 TSHBP01222 138 aa11.21□□□□□ -0.61
RPAP3-207ENST00000551293 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
RPAP3-207ENST00000551293 EIF5AL1Q6IS14 154 aaKnown RBP11.21□□□□□ -0.61
RPAP3-207ENST00000551293 CDC42SE2Q9NRR3 84 aa11.21□□□□□ -0.61
RPAP3-207ENST00000551293 A0A0U1RQV1 116 aa11.2□□□□□ -0.62
RPAP3-207ENST00000551293 KRTAP9-6A0A140TA67 174 aa11.2□□□□□ -0.62
RPAP3-207ENST00000551293 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
RPAP3-207ENST00000551293 MRAP2Q96G30 205 aa11.2□□□□□ -0.62
RPAP3-207ENST00000551293 RNASE7Q9H1E1 156 aaKnown RBP11.2□□□□□ -0.62
RPAP3-207ENST00000551293 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
RPAP3-207ENST00000551293 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
RPAP3-207ENST00000551293 H0Y9J4 135 aa11.19□□□□□ -0.62
RPAP3-207ENST00000551293 COX7A2LO14548 114 aa11.19□□□□□ -0.62
RPAP3-207ENST00000551293 BCL2L11O43521 198 aa11.19□□□□□ -0.62
RPAP3-207ENST00000551293 ESDP10768 282 aa11.19□□□□□ -0.62
RPAP3-207ENST00000551293 CNFNQ9BYD5 112 aa11.19□□□□□ -0.62
RPAP3-207ENST00000551293 SMIM15Q7Z3B0 74 aa11.18□□□□□ -0.62
RPAP3-207ENST00000551293 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
RPAP3-207ENST00000551293 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
RPAP3-207ENST00000551293 SMIM12Q96EX1 92 aa11.17□□□□□ -0.62
RPAP3-207ENST00000551293 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
RPAP3-207ENST00000551293 TRAV13-1A0A0B4J241 112 aa11.15□□□□□ -0.62
RPAP3-207ENST00000551293 UBE2D1P51668 147 aa11.15□□□□□ -0.62
RPAP3-207ENST00000551293 TEX261Q6UWH6 196 aa11.15□□□□□ -0.62
RPAP3-207ENST00000551293 FAM19A5Q7Z5A7 132 aaPredicted RBP11.15□□□□□ -0.62
RPAP3-207ENST00000551293 ST20Q9HBF5 79 aa11.15□□□□□ -0.62
RPAP3-207ENST00000551293 BIN3Q9NQY0 253 aa11.15□□□□□ -0.62
RPAP3-207ENST00000551293 IGLV1-50A0A075B6I6 118 aa11.14□□□□□ -0.63
RPAP3-207ENST00000551293 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
RPAP3-207ENST00000551293 K7EN84 100 aa11.14□□□□□ -0.63
RPAP3-207ENST00000551293 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
RPAP3-207ENST00000551293 ZNF345Q14585 488 aa11.14□□□□□ -0.63
RPAP3-207ENST00000551293 MRPL52Q86TS9 123 aaKnown RBP11.14□□□□□ -0.63
RPAP3-207ENST00000551293 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
RPAP3-207ENST00000551293 C1orf196B1AJZ1 125 aa11.13□□□□□ -0.63
RPAP3-207ENST00000551293 TSPAN13O95857 204 aa11.13□□□□□ -0.63
RPAP3-207ENST00000551293 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
RPAP3-207ENST00000551293 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
RPAP3-207ENST00000551293 PDE6DO43924 150 aa11.12□□□□□ -0.63
RPAP3-207ENST00000551293 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
RPAP3-207ENST00000551293 OCC1Q8TAD7 63 aa11.11□□□□□ -0.63
RPAP3-207ENST00000551293 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
RPAP3-207ENST00000551293 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
RPAP3-207ENST00000551293 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
RPAP3-207ENST00000551293 C10orf25Q5T742 122 aa11.09□□□□□ -0.63
RPAP3-207ENST00000551293 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
RPAP3-207ENST00000551293 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
RPAP3-207ENST00000551293 Q6ZUT4 128 aa11.08□□□□□ -0.64
RPAP3-207ENST00000551293 FCER1GP30273 86 aa11.07□□□□□ -0.64
RPAP3-207ENST00000551293 UBE2BP63146 152 aa11.07□□□□□ -0.64
RPAP3-207ENST00000551293 RNF151Q2KHN1 245 aa11.07□□□□□ -0.64
RPAP3-207ENST00000551293 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
RPAP3-207ENST00000551293 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
RPAP3-207ENST00000551293 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
RPAP3-207ENST00000551293 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
RPAP3-207ENST00000551293 TEX46H3BTG2 121 aa11.06□□□□□ -0.64
RPAP3-207ENST00000551293 GATCO43716 136 aaKnown RBP11.06□□□□□ -0.64
RPAP3-207ENST00000551293 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
RPAP3-207ENST00000551293 HMSDA8MTL9 139 aa11.05□□□□□ -0.64
RPAP3-207ENST00000551293 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
RPAP3-207ENST00000551293 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
RPAP3-207ENST00000551293 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
RPAP3-207ENST00000551293 M0QXV9 152 aa11.04□□□□□ -0.64
RPAP3-207ENST00000551293 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
RPAP3-207ENST00000551293 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
RPAP3-207ENST00000551293 RAB4AP20338 218 aa11.03□□□□□ -0.64
RPAP3-207ENST00000551293 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
RPAP3-207ENST00000551293 C6orf48Q9UBA6 75 aa11.03□□□□□ -0.64
RPAP3-207ENST00000551293 VCYO14598 125 aa11.02□□□□□ -0.65
RPAP3-207ENST00000551293 NDUFA1O15239 70 aa11.02□□□□□ -0.65
RPAP3-207ENST00000551293 BORCS7Q96B45 105 aa11.02□□□□□ -0.65
RPAP3-207ENST00000551293 A8MWL6 223 aa11.01□□□□□ -0.65
RPAP3-207ENST00000551293 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
RPAP3-207ENST00000551293 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
RPAP3-207ENST00000551293 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
RPAP3-207ENST00000551293 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
RPAP3-207ENST00000551293 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
RPAP3-207ENST00000551293 CEBPGP53567 150 aa10.98□□□□□ -0.65
RPAP3-207ENST00000551293 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
RPAP3-207ENST00000551293 FAM210AQ96ND0 272 aa10.98□□□□□ -0.65
RPAP3-207ENST00000551293 MUC17Q685J3 4493 aa10.97□□□□□ -0.65
RPAP3-207ENST00000551293 HIGD1CA8MV81 97 aa10.97□□□□□ -0.65
RPAP3-207ENST00000551293 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
RPAP3-207ENST00000551293 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
RPAP3-207ENST00000551293 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
RPAP3-207ENST00000551293 NRACQ8N912 160 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms