RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 GAGE2BQ13066 116 aa7.06□□□□□ -1.28
SMARCD1-208ENST00000550280 CD164L2Q6UWJ8 174 aa7.06□□□□□ -1.28
SMARCD1-208ENST00000550280 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
SMARCD1-208ENST00000550280 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
SMARCD1-208ENST00000550280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 PMCHP20382 165 aa7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 CAMPP49913 170 aa7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 POLR2KP53803 58 aaKnown RBP7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 NUP35Q8NFH5 326 aa7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 BIN3Q9NQY0 253 aa7.05□□□□□ -1.28
SMARCD1-208ENST00000550280 C9orf116Q5BN46 136 aaPredicted RBP7.04□□□□□ -1.28
SMARCD1-208ENST00000550280 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 LOC107984640A0A0U1RRK4 108 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 RNASE13Q5GAN3 156 aaKnown RBP7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 TEX261Q6UWH6 196 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 PHF5AQ7RTV0 110 aaKnown RBP7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 ZNF664Q8N3J9 261 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 MRAP2Q96G30 205 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 TMEM101Q96IK0 257 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 BTF3L4Q96K17 158 aa7.03□□□□□ -1.28
SMARCD1-208ENST00000550280 SS18Q15532 418 aa7.02□□□□□ -1.29
SMARCD1-208ENST00000550280 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
SMARCD1-208ENST00000550280 ST20Q9HBF5 79 aa7.02□□□□□ -1.29
SMARCD1-208ENST00000550280 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
SMARCD1-208ENST00000550280 C7orf77A4D0Y5 90 aa7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 TEX46H3BTG2 121 aa7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 GATCO43716 136 aaKnown RBP7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 APOMO95445 188 aa7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 RAB4AP20338 218 aa7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 FAM231DQ6ZW35 169 aa7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
SMARCD1-208ENST00000550280 SMKR1H3BMG3 65 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 COX7A2LO14548 114 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 C1orf137Q5JT78 98 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 EIF5AL1Q6IS14 154 aaKnown RBP7□□□□□ -1.29
SMARCD1-208ENST00000550280 SMIM15Q7Z3B0 74 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 C5orf38Q86SI9 138 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 AMN1Q8IY45 258 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 CAMK2N2Q96S95 79 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 TMEM191AQ9H0A3 160 aa7□□□□□ -1.29
SMARCD1-208ENST00000550280 FAM168BA1KXE4 195 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 A8MWL6 223 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 C1orf196B1AJZ1 125 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 MT-ND6P03923 174 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 CT83Q5H943 113 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 Q6ZUT4 128 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 NRACQ8N912 160 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 ISOC2Q96AB3 205 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 C2orf48Q96LS8 159 aa6.99□□□□□ -1.29
SMARCD1-208ENST00000550280 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
SMARCD1-208ENST00000550280 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
SMARCD1-208ENST00000550280 MALP21145 153 aa6.98□□□□□ -1.29
SMARCD1-208ENST00000550280 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
SMARCD1-208ENST00000550280 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
SMARCD1-208ENST00000550280 CSDC2Q9Y534 153 aaKnown RBP6.98□□□□□ -1.29
SMARCD1-208ENST00000550280 HIGD1CA8MV81 97 aa6.97□□□□□ -1.29
SMARCD1-208ENST00000550280 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
SMARCD1-208ENST00000550280 TAGLN2P37802 199 aaKnown RBP6.97□□□□□ -1.29
SMARCD1-208ENST00000550280 SPAG11BQ08648 103 aa6.97□□□□□ -1.29
SMARCD1-208ENST00000550280 SLC51BQ86UW2 128 aa6.97□□□□□ -1.29
SMARCD1-208ENST00000550280 FAM210AQ96ND0 272 aa6.97□□□□□ -1.29
SMARCD1-208ENST00000550280 A0A1B0GUT8 65 aa6.96□□□□□ -1.3
SMARCD1-208ENST00000550280 H0Y9J4 135 aa6.96□□□□□ -1.3
SMARCD1-208ENST00000550280 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
SMARCD1-208ENST00000550280 TSKUQ8WUA8 353 aa6.96□□□□□ -1.3
SMARCD1-208ENST00000550280 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
SMARCD1-208ENST00000550280 VCYO14598 125 aa6.95□□□□□ -1.3
SMARCD1-208ENST00000550280 LINC01551Q86U37 167 aa6.95□□□□□ -1.3
SMARCD1-208ENST00000550280 IGHV3OR16-9A0A0B4J2B5 98 aa6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 SUMO2P61956 95 aaKnown RBP6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 RPL39P62891 51 aaKnown RBP6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 TCTE3Q8IZS6 198 aa6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 DIRC1Q969H9 104 aa6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 MRPL35Q9NZE8 188 aaKnown RBP6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 V9GYV3 84 aa6.94□□□□□ -1.3
SMARCD1-208ENST00000550280 FCER1GP30273 86 aa6.93□□□□□ -1.3
SMARCD1-208ENST00000550280 CEBPGP53567 150 aa6.93□□□□□ -1.3
SMARCD1-208ENST00000550280 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
SMARCD1-208ENST00000550280 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
SMARCD1-208ENST00000550280 A0A087WZ39 114 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 FAM19A5Q7Z5A7 132 aaPredicted RBP6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 BORCS7Q96B45 105 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
SMARCD1-208ENST00000550280 IGLV1-50A0A075B6I6 118 aa6.91□□□□□ -1.3
SMARCD1-208ENST00000550280 SMIM7Q9BQ49 75 aa6.91□□□□□ -1.3
SMARCD1-208ENST00000550280 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
SMARCD1-208ENST00000550280 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms