RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 ADCYAP1P18509 176 aa11.62□□□□□ -0.55
TUBA1A-206ENST00000550254 FCER1GP30273 86 aa11.62□□□□□ -0.55
TUBA1A-206ENST00000550254 C9orf163Q8N9P6 203 aa11.62□□□□□ -0.55
TUBA1A-206ENST00000550254 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
TUBA1A-206ENST00000550254 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
TUBA1A-206ENST00000550254 RPL32P62910 135 aaKnown RBP11.61□□□□□ -0.55
TUBA1A-206ENST00000550254 KIR2DL4Q99706 377 aa11.61□□□□□ -0.55
TUBA1A-206ENST00000550254 hDV102S1A0JD36 115 aa11.6□□□□□ -0.55
TUBA1A-206ENST00000550254 NPYP01303 97 aa11.6□□□□□ -0.55
TUBA1A-206ENST00000550254 SLPIP03973 132 aa11.6□□□□□ -0.55
TUBA1A-206ENST00000550254 UQCC3Q6UW78 93 aa11.6□□□□□ -0.55
TUBA1A-206ENST00000550254 SCXQ7RTU7 201 aa11.6□□□□□ -0.55
TUBA1A-206ENST00000550254 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
TUBA1A-206ENST00000550254 LINC00959A0A1B0GUT2 108 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 TMEM218A2RU14 115 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 CNBPP62633 177 aaKnown RBP11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 UBE2D4Q9Y2X8 147 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 VPS13BQ7Z7G8 4022 aa11.59□□□□□ -0.55
TUBA1A-206ENST00000550254 PPBPP02775 128 aa11.58□□□□□ -0.56
TUBA1A-206ENST00000550254 FOXI1Q12951 378 aa11.58□□□□□ -0.56
TUBA1A-206ENST00000550254 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
TUBA1A-206ENST00000550254 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
TUBA1A-206ENST00000550254 PHOX2AO14813 284 aa11.57□□□□□ -0.56
TUBA1A-206ENST00000550254 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
TUBA1A-206ENST00000550254 CCL25O15444 150 aa11.56□□□□□ -0.56
TUBA1A-206ENST00000550254 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
TUBA1A-206ENST00000550254 XCL1P47992 114 aa11.56□□□□□ -0.56
TUBA1A-206ENST00000550254 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
TUBA1A-206ENST00000550254 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
TUBA1A-206ENST00000550254 ORMDL3Q8N138 153 aa11.56□□□□□ -0.56
TUBA1A-206ENST00000550254 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
TUBA1A-206ENST00000550254 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
TUBA1A-206ENST00000550254 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
TUBA1A-206ENST00000550254 PANO1I0J062 215 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 TCAPO15273 167 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 SS18Q15532 418 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 LINC00528Q8N1L1 170 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 TIMM21Q9BVV7 248 aa11.54□□□□□ -0.56
TUBA1A-206ENST00000550254 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
TUBA1A-206ENST00000550254 Q6ZUT4 128 aa11.53□□□□□ -0.56
TUBA1A-206ENST00000550254 COMMD7Q86VX2 200 aa11.53□□□□□ -0.56
TUBA1A-206ENST00000550254 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
TUBA1A-206ENST00000550254 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
TUBA1A-206ENST00000550254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.53□□□□□ -0.56
TUBA1A-206ENST00000550254 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.57
TUBA1A-206ENST00000550254 PRSS47A8MTI9 375 aa11.52□□□□□ -0.57
TUBA1A-206ENST00000550254 IMMP2LQ96T52 175 aa11.52□□□□□ -0.57
TUBA1A-206ENST00000550254 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.51□□□□□ -0.57
TUBA1A-206ENST00000550254 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
TUBA1A-206ENST00000550254 CTDSP1Q9GZU7 261 aa11.51□□□□□ -0.57
TUBA1A-206ENST00000550254 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
TUBA1A-206ENST00000550254 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
TUBA1A-206ENST00000550254 SRRM2Q9UQ35 2752 aaKnown RBP11.5□□□□□ -0.57
TUBA1A-206ENST00000550254 C1orf196B1AJZ1 125 aa11.49□□□□□ -0.57
TUBA1A-206ENST00000550254 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
TUBA1A-206ENST00000550254 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
TUBA1A-206ENST00000550254 IGHV1-58A0A0C4DH39 117 aa11.48□□□□□ -0.57
TUBA1A-206ENST00000550254 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
TUBA1A-206ENST00000550254 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
TUBA1A-206ENST00000550254 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
TUBA1A-206ENST00000550254 C10orf91Q5T1B1 145 aa11.48□□□□□ -0.57
TUBA1A-206ENST00000550254 RAB5AP20339 215 aa11.47□□□□□ -0.57
TUBA1A-206ENST00000550254 KRTAP10-4P60372 401 aaPredicted RBP11.47□□□□□ -0.57
TUBA1A-206ENST00000550254 LINC00526Q96FQ7 95 aa11.47□□□□□ -0.57
TUBA1A-206ENST00000550254 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
TUBA1A-206ENST00000550254 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
TUBA1A-206ENST00000550254 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.57
TUBA1A-206ENST00000550254 Q8N8P6 123 aa11.46□□□□□ -0.57
TUBA1A-206ENST00000550254 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
TUBA1A-206ENST00000550254 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
TUBA1A-206ENST00000550254 COX7A2LO14548 114 aa11.44□□□□□ -0.58
TUBA1A-206ENST00000550254 COX6A2Q02221 97 aa11.44□□□□□ -0.58
TUBA1A-206ENST00000550254 PRSS3P2Q8NHM4 247 aa11.44□□□□□ -0.58
TUBA1A-206ENST00000550254 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
TUBA1A-206ENST00000550254 KIAA1644Q3SXP7 199 aa11.43□□□□□ -0.58
TUBA1A-206ENST00000550254 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
TUBA1A-206ENST00000550254 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
TUBA1A-206ENST00000550254 PYGO1Q9Y3Y4 419 aa11.43□□□□□ -0.58
TUBA1A-206ENST00000550254 MALP21145 153 aa11.42□□□□□ -0.58
TUBA1A-206ENST00000550254 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
TUBA1A-206ENST00000550254 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
TUBA1A-206ENST00000550254 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
TUBA1A-206ENST00000550254 A0A087WYN8 130 aa11.41□□□□□ -0.58
TUBA1A-206ENST00000550254 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
TUBA1A-206ENST00000550254 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
TUBA1A-206ENST00000550254 IFITM10A6NMD0 228 aa11.4□□□□□ -0.58
TUBA1A-206ENST00000550254 S100PP25815 95 aa11.4□□□□□ -0.58
TUBA1A-206ENST00000550254 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 SYCNQ0VAF6 134 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 RHEBQ15382 184 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 DPH3Q96FX2 82 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 CARD19Q96LW7 228 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms