RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 A8MTW9 85 aa16.7■□□□□ 0.26
NPAS3-206ENST00000548645 IGHV4-59P01825 116 aa16.69■□□□□ 0.26
NPAS3-206ENST00000548645 IGHV3OR16-12A0A075B7B8 117 aa16.69■□□□□ 0.26
NPAS3-206ENST00000548645 AVPP01185 164 aa16.69■□□□□ 0.26
NPAS3-206ENST00000548645 DAZ2Q13117 558 aaKnown RBP16.69■□□□□ 0.26
NPAS3-206ENST00000548645 DAZ4Q86SG3 579 aaKnown RBP16.69■□□□□ 0.26
NPAS3-206ENST00000548645 DAZ3Q9NR90 486 aaKnown RBP16.69■□□□□ 0.26
NPAS3-206ENST00000548645 IGHV4-30-2A0A087WSY4 118 aa16.68■□□□□ 0.26
NPAS3-206ENST00000548645 LINC00242Q5T6M2 205 aa16.68■□□□□ 0.26
NPAS3-206ENST00000548645 CCL19Q99731 98 aa16.68■□□□□ 0.26
NPAS3-206ENST00000548645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.67■□□□□ 0.26
NPAS3-206ENST00000548645 Q8N2B8 174 aa16.67■□□□□ 0.26
NPAS3-206ENST00000548645 SMCR5Q8TEV8 140 aa16.67■□□□□ 0.26
NPAS3-206ENST00000548645 FLNCQ14315 2725 aa16.67■□□□□ 0.26
NPAS3-206ENST00000548645 RBMY1BA6NDE4 496 aaKnown RBP16.67■□□□□ 0.26
NPAS3-206ENST00000548645 RBMY1EA6NEQ0 496 aaKnown RBP16.67■□□□□ 0.26
NPAS3-206ENST00000548645 RBMY1DP0C7P1 496 aaKnown RBP16.67■□□□□ 0.26
NPAS3-206ENST00000548645 BAALC-AS2P0C853 105 aa16.67■□□□□ 0.26
NPAS3-206ENST00000548645 SOSTDC1Q6X4U4 206 aa16.67■□□□□ 0.26
NPAS3-206ENST00000548645 BEAN1Q3B7T3 259 aa16.65■□□□□ 0.26
NPAS3-206ENST00000548645 PRIMA1Q86XR5 153 aa16.65■□□□□ 0.26
NPAS3-206ENST00000548645 MYO18BQ8IUG5 2567 aa16.65■□□□□ 0.26
NPAS3-206ENST00000548645 SMIM1B2RUZ4 78 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 RS1O15537 224 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 ATP5J2P56134 94 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 C3orf56Q8N813 242 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 C11orf72Q8NBR9 251 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 DEFB112Q30KQ8 113 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 SDIM1Q6ZPB5 146 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 FAM19A3Q7Z5A8 133 aa16.64■□□□□ 0.25
NPAS3-206ENST00000548645 PEMTQ9UBM1 199 aa16.63■□□□□ 0.25
NPAS3-206ENST00000548645 B4DSR2 109 aa16.63■□□□□ 0.25
NPAS3-206ENST00000548645 ATP5G1P05496 136 aa16.63■□□□□ 0.25
NPAS3-206ENST00000548645 FAM222AQ5U5X8 452 aa16.63■□□□□ 0.25
NPAS3-206ENST00000548645 UBE2E2Q96LR5 201 aa16.63■□□□□ 0.25
NPAS3-206ENST00000548645 INAFM2P0DMQ5 153 aa16.62■□□□□ 0.25
NPAS3-206ENST00000548645 C3orf22Q8N5N4 141 aa16.62■□□□□ 0.25
NPAS3-206ENST00000548645 CREBBPQ92793 2442 aa16.6■□□□□ 0.25
NPAS3-206ENST00000548645 CXCL5P42830 114 aa16.6■□□□□ 0.25
NPAS3-206ENST00000548645 C9orf153Q5TBE3 101 aa16.6■□□□□ 0.25
NPAS3-206ENST00000548645 PPDPFQ9H3Y8 114 aa16.6■□□□□ 0.25
NPAS3-206ENST00000548645 TRAV13-1A0A0B4J241 112 aa16.59■□□□□ 0.25
NPAS3-206ENST00000548645 UQCRQO14949 82 aa16.59■□□□□ 0.25
NPAS3-206ENST00000548645 CSDC2Q9Y534 153 aaKnown RBP16.59■□□□□ 0.25
NPAS3-206ENST00000548645 CSPG4Q6UVK1 2322 aa16.58■□□□□ 0.24
NPAS3-206ENST00000548645 FAM218AQ96MZ4 157 aa16.58■□□□□ 0.24
NPAS3-206ENST00000548645 C22orf24Q9Y442 160 aa16.58■□□□□ 0.24
NPAS3-206ENST00000548645 LINC00694P0DN24 101 aa16.57■□□□□ 0.24
NPAS3-206ENST00000548645 HIST2H2BCQ6DN03 193 aa16.57■□□□□ 0.24
NPAS3-206ENST00000548645 HIST2H2BDQ6DRA6 164 aa16.57■□□□□ 0.24
NPAS3-206ENST00000548645 CFAP161Q6P656 301 aa16.57■□□□□ 0.24
NPAS3-206ENST00000548645 INSP01308 110 aa16.57■□□□□ 0.24
NPAS3-206ENST00000548645 NDUFA7O95182 113 aa16.56■□□□□ 0.24
NPAS3-206ENST00000548645 PF4P02776 101 aa16.56■□□□□ 0.24
NPAS3-206ENST00000548645 C5orf38Q86SI9 138 aa16.56■□□□□ 0.24
NPAS3-206ENST00000548645 MAP1AP78559 2803 aaPredicted RBP16.56■□□□□ 0.24
NPAS3-206ENST00000548645 USP9XQ93008 2570 aaPredicted RBP16.56■□□□□ 0.24
NPAS3-206ENST00000548645 SLURP1P55000 103 aa16.56■□□□□ 0.24
NPAS3-206ENST00000548645 TRAV13-2A0A0B4J235 113 aa16.55■□□□□ 0.24
NPAS3-206ENST00000548645 ZNF462Q96JM2 2506 aa16.55■□□□□ 0.24
NPAS3-206ENST00000548645 GAGE2AQ6NT46 116 aa16.55■□□□□ 0.24
NPAS3-206ENST00000548645 LINC00526Q96FQ7 95 aa16.55■□□□□ 0.24
NPAS3-206ENST00000548645 F5H768 121 aa16.54■□□□□ 0.24
NPAS3-206ENST00000548645 MALP21145 153 aa16.54■□□□□ 0.24
NPAS3-206ENST00000548645 SPG11Q96JI7 2443 aa16.54■□□□□ 0.24
NPAS3-206ENST00000548645 RPL28P46779 137 aaKnown RBP16.53■□□□□ 0.24
NPAS3-206ENST00000548645 MAP6D1Q9H9H5 199 aa16.53■□□□□ 0.24
NPAS3-206ENST00000548645 VPS13CQ709C8 3753 aa16.53■□□□□ 0.24
NPAS3-206ENST00000548645 RPL36AP83881 106 aaKnown RBP16.53■□□□□ 0.24
NPAS3-206ENST00000548645 RPL36ALQ969Q0 106 aaKnown RBP16.53■□□□□ 0.24
NPAS3-206ENST00000548645 UTP20O75691 2785 aaKnown RBP16.53■□□□□ 0.24
NPAS3-206ENST00000548645 CRPP02741 224 aa16.52■□□□□ 0.23
NPAS3-206ENST00000548645 GNLYP22749 145 aa16.52■□□□□ 0.23
NPAS3-206ENST00000548645 CDC42SE2Q9NRR3 84 aa16.52■□□□□ 0.23
NPAS3-206ENST00000548645 VPREB3Q9UKI3 123 aa16.52■□□□□ 0.23
NPAS3-206ENST00000548645 DEFB136Q30KP8 78 aa16.51■□□□□ 0.23
NPAS3-206ENST00000548645 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
NPAS3-206ENST00000548645 Q9HAA7 133 aa16.51■□□□□ 0.23
NPAS3-206ENST00000548645 ZNF702PQ9H963 129 aa16.5■□□□□ 0.23
NPAS3-206ENST00000548645 TRBV10-1A0A0K0K1A3 114 aa16.49■□□□□ 0.23
NPAS3-206ENST00000548645 FAM208BQ5VWN6 2430 aa16.49■□□□□ 0.23
NPAS3-206ENST00000548645 CENPEQ02224 2701 aa16.49■□□□□ 0.23
NPAS3-206ENST00000548645 NTM-AS1Q6ZSK4 140 aa16.49■□□□□ 0.23
NPAS3-206ENST00000548645 COX7CP15954 63 aa16.48■□□□□ 0.23
NPAS3-206ENST00000548645 TRGV1A0A0A0MS02 117 aa16.48■□□□□ 0.23
NPAS3-206ENST00000548645 CRYBG3Q68DQ2 2970 aa16.47■□□□□ 0.23
NPAS3-206ENST00000548645 K7EQD1 137 aa16.47■□□□□ 0.23
NPAS3-206ENST00000548645 C18orf65Q6ZTR6 163 aa16.47■□□□□ 0.23
NPAS3-206ENST00000548645 LRRK2Q5S007 2527 aa16.47■□□□□ 0.23
NPAS3-206ENST00000548645 DNAL4O96015 105 aa16.47■□□□□ 0.23
NPAS3-206ENST00000548645 DYNLRB2Q8TF09 96 aa16.46■□□□□ 0.23
NPAS3-206ENST00000548645 LINC01356Q8N9X3 169 aa16.46■□□□□ 0.22
NPAS3-206ENST00000548645 Q96MF0 132 aa16.46■□□□□ 0.22
NPAS3-206ENST00000548645 XCL2Q9UBD3 114 aa16.46■□□□□ 0.22
NPAS3-206ENST00000548645 LINC00337Q8N6G1 96 aa16.45■□□□□ 0.22
NPAS3-206ENST00000548645 ATOX1O00244 68 aa16.45■□□□□ 0.22
NPAS3-206ENST00000548645 SND1-IT1Q9HBX3 110 aa16.45■□□□□ 0.22
NPAS3-206ENST00000548645 PRB1P04280 392 aa16.44■□□□□ 0.22
NPAS3-206ENST00000548645 MIR7-3HGQ8N6C7 128 aa16.44■□□□□ 0.22
NPAS3-206ENST00000548645 HIST1H4AP62805 103 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms