RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 RHOHQ15669 191 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 GCSAMLQ5JQS6 135 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 OR10AG1Q8NH19 301 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 DAZAP1Q96EP5 407 aaKnown RBP9.47□□□□□ -0.89
PTPRB-205ENST00000547715 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 GFRA4Q9GZZ7 299 aa9.47□□□□□ -0.89
PTPRB-205ENST00000547715 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
PTPRB-205ENST00000547715 IGLV2-11P01706 119 aa9.46□□□□□ -0.9
PTPRB-205ENST00000547715 MT1HL1P0DM35 61 aa9.46□□□□□ -0.9
PTPRB-205ENST00000547715 CSN1S1P47710 185 aa9.46□□□□□ -0.9
PTPRB-205ENST00000547715 HSD52Q0P140 79 aa9.46□□□□□ -0.9
PTPRB-205ENST00000547715 TMEM97Q5BJF2 176 aa9.46□□□□□ -0.9
PTPRB-205ENST00000547715 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 TRBV6-4A0A1B0GX49 114 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 RBAKDNA6NC62 111 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 FAM167A-AS1Q96KT0 104 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 NDFIP1Q9BT67 221 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 VCX2Q9H322 139 aa9.45□□□□□ -0.9
PTPRB-205ENST00000547715 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
PTPRB-205ENST00000547715 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
PTPRB-205ENST00000547715 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
PTPRB-205ENST00000547715 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
PTPRB-205ENST00000547715 IGKV2D-24A0A075B6R9 120 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 A8MWL6 223 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 FABP2P12104 132 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 HBBP68871 147 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 LINC01545Q5VT33 79 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
PTPRB-205ENST00000547715 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 RMI2Q96E14 147 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 PAXXQ9BUH6 204 aa9.43□□□□□ -0.9
PTPRB-205ENST00000547715 MUC21A0A0G2JKD1 596 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 MUC21A0A140T8X8 626 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 F2Z2F3 143 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 C5orf17Q8NAS9 161 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 DNAJC30Q96LL9 226 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
PTPRB-205ENST00000547715 A0A1B0GXF2 115 aa9.41□□□□□ -0.9
PTPRB-205ENST00000547715 A6NJY4 79 aa9.41□□□□□ -0.9
PTPRB-205ENST00000547715 ERASQ7Z444 233 aa9.41□□□□□ -0.9
PTPRB-205ENST00000547715 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
PTPRB-205ENST00000547715 TRAV8-1A0A0A6YYK1 113 aa9.4□□□□□ -0.9
PTPRB-205ENST00000547715 TRAV21A0A0B4J279 112 aa9.4□□□□□ -0.9
PTPRB-205ENST00000547715 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
PTPRB-205ENST00000547715 F8W1H4 67 aa9.4□□□□□ -0.9
PTPRB-205ENST00000547715 MGST1P10620 155 aaKnown RBP9.4□□□□□ -0.9
PTPRB-205ENST00000547715 ASIPP42127 132 aa9.4□□□□□ -0.9
PTPRB-205ENST00000547715 TNXBP22105 4242 aa9.39□□□□□ -0.91
PTPRB-205ENST00000547715 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
PTPRB-205ENST00000547715 BOD1L2Q8IYS8 172 aa9.39□□□□□ -0.91
PTPRB-205ENST00000547715 HIGD1BQ9P298 99 aa9.39□□□□□ -0.91
PTPRB-205ENST00000547715 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 GAGE4Q13068 117 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 GAGE5Q13069 117 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 NUP35Q8NFH5 326 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
PTPRB-205ENST00000547715 A0A1W2PPM0 123 aa9.37□□□□□ -0.91
PTPRB-205ENST00000547715 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
PTPRB-205ENST00000547715 Q6ZRU5 148 aa9.37□□□□□ -0.91
PTPRB-205ENST00000547715 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
PTPRB-205ENST00000547715 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
PTPRB-205ENST00000547715 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
PTPRB-205ENST00000547715 TRBV6-1A0A0K0K1D8 114 aa9.36□□□□□ -0.91
PTPRB-205ENST00000547715 SMIM13P0DJ93 91 aa9.36□□□□□ -0.91
PTPRB-205ENST00000547715 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
PTPRB-205ENST00000547715 MRAP2Q96G30 205 aa9.36□□□□□ -0.91
PTPRB-205ENST00000547715 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
PTPRB-205ENST00000547715 SPCS1Q9Y6A9 102 aa9.36□□□□□ -0.91
PTPRB-205ENST00000547715 LINC00694P0DN24 101 aa9.35□□□□□ -0.91
PTPRB-205ENST00000547715 TAL2Q16559 108 aa9.35□□□□□ -0.91
PTPRB-205ENST00000547715 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
PTPRB-205ENST00000547715 RPP21Q9H633 154 aaKnown RBP9.35□□□□□ -0.91
PTPRB-205ENST00000547715 PEX7O00628 323 aa9.34□□□□□ -0.91
PTPRB-205ENST00000547715 FOXA3P55318 350 aaPredicted RBP9.34□□□□□ -0.91
PTPRB-205ENST00000547715 RIGQ13278 110 aa9.34□□□□□ -0.91
PTPRB-205ENST00000547715 GOLT1AQ6ZVE7 132 aa9.34□□□□□ -0.91
PTPRB-205ENST00000547715 Q9UF83 564 aa9.34□□□□□ -0.91
PTPRB-205ENST00000547715 A0A087WX48 190 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 PGPA6NDG6 321 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 PRSS47A8MTI9 375 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 C2orf91Q6ZV80 131 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 Q6ZVH6 145 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 C9orf85Q96MD7 179 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 AP5S1Q9NUS5 200 aa9.33□□□□□ -0.92
PTPRB-205ENST00000547715 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
PTPRB-205ENST00000547715 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
PTPRB-205ENST00000547715 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
PTPRB-205ENST00000547715 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
PTPRB-205ENST00000547715 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
PTPRB-205ENST00000547715 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
PTPRB-205ENST00000547715 H3BUT2 72 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms