RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 SYCNQ0VAF6 134 aa14.43□□□□□ -0.1
SMARCD1-204ENST00000547637 FAM231DQ6ZW35 169 aa14.43□□□□□ -0.1
SMARCD1-204ENST00000547637 FAM231BA6NCW3 169 aa14.42□□□□□ -0.1
SMARCD1-204ENST00000547637 TMEM250H0YL14 139 aa14.42□□□□□ -0.1
SMARCD1-204ENST00000547637 SMAGPQ0VAQ4 97 aa14.42□□□□□ -0.1
SMARCD1-204ENST00000547637 CD164L2Q6UWJ8 174 aa14.42□□□□□ -0.1
SMARCD1-204ENST00000547637 ESDP10768 282 aa14.41□□□□□ -0.1
SMARCD1-204ENST00000547637 CT83Q5H943 113 aa14.41□□□□□ -0.1
SMARCD1-204ENST00000547637 MALP21145 153 aa14.4□□□□□ -0.1
SMARCD1-204ENST00000547637 CDC42SE2Q9NRR3 84 aa14.4□□□□□ -0.1
SMARCD1-204ENST00000547637 BLOC1S1P78537 153 aa14.39□□□□□ -0.11
SMARCD1-204ENST00000547637 MRPL52Q86TS9 123 aaKnown RBP14.39□□□□□ -0.11
SMARCD1-204ENST00000547637 TCTE3Q8IZS6 198 aa14.39□□□□□ -0.11
SMARCD1-204ENST00000547637 ZNF664Q8N3J9 261 aa14.39□□□□□ -0.11
SMARCD1-204ENST00000547637 TMEM242Q9NWH2 141 aa14.39□□□□□ -0.11
SMARCD1-204ENST00000547637 C7orf77A4D0Y5 90 aa14.38□□□□□ -0.11
SMARCD1-204ENST00000547637 TSHBP01222 138 aa14.38□□□□□ -0.11
SMARCD1-204ENST00000547637 LINC00526Q96FQ7 95 aa14.38□□□□□ -0.11
SMARCD1-204ENST00000547637 LOC107984640A0A0U1RRK4 108 aa14.37□□□□□ -0.11
SMARCD1-204ENST00000547637 A0A1B0GUT8 65 aa14.37□□□□□ -0.11
SMARCD1-204ENST00000547637 C1orf196B1AJZ1 125 aa14.37□□□□□ -0.11
SMARCD1-204ENST00000547637 PPP1R17O96001 155 aa14.37□□□□□ -0.11
SMARCD1-204ENST00000547637 CAMPP49913 170 aa14.37□□□□□ -0.11
SMARCD1-204ENST00000547637 TMEM191AQ9H0A3 160 aa14.37□□□□□ -0.11
SMARCD1-204ENST00000547637 TRBV27A0A0K0K1C4 114 aa14.36□□□□□ -0.11
SMARCD1-204ENST00000547637 FCER1GP30273 86 aa14.36□□□□□ -0.11
SMARCD1-204ENST00000547637 CEBPGP53567 150 aa14.36□□□□□ -0.11
SMARCD1-204ENST00000547637 VCYO14598 125 aa14.35□□□□□ -0.11
SMARCD1-204ENST00000547637 PTTG1IPP53801 180 aa14.35□□□□□ -0.11
SMARCD1-204ENST00000547637 POLR2KP53803 58 aaKnown RBP14.35□□□□□ -0.11
SMARCD1-204ENST00000547637 GAGE2BQ13066 116 aa14.35□□□□□ -0.11
SMARCD1-204ENST00000547637 TSKUQ8WUA8 353 aa14.35□□□□□ -0.11
SMARCD1-204ENST00000547637 IGLV4-69A0A075B6H9 119 aa14.34□□□□□ -0.11
SMARCD1-204ENST00000547637 COX7A2LO14548 114 aa14.34□□□□□ -0.11
SMARCD1-204ENST00000547637 HIGD1CA8MV81 97 aa14.33□□□□□ -0.12
SMARCD1-204ENST00000547637 RAB4AP20338 218 aa14.33□□□□□ -0.12
SMARCD1-204ENST00000547637 KRTAP10-8P60410 259 aa14.33□□□□□ -0.12
SMARCD1-204ENST00000547637 SRSF9Q13242 221 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCD1-204ENST00000547637 APOMO95445 188 aa14.32□□□□□ -0.12
SMARCD1-204ENST00000547637 TMEM18Q96B42 140 aa14.32□□□□□ -0.12
SMARCD1-204ENST00000547637 CAMK2N2Q96S95 79 aa14.32□□□□□ -0.12
SMARCD1-204ENST00000547637 KIR2DL4Q99706 377 aa14.32□□□□□ -0.12
SMARCD1-204ENST00000547637 CSDC2Q9Y534 153 aaKnown RBP14.32□□□□□ -0.12
SMARCD1-204ENST00000547637 GAS8-AS1O95177 125 aa14.3□□□□□ -0.12
SMARCD1-204ENST00000547637 RIGQ13278 110 aa14.3□□□□□ -0.12
SMARCD1-204ENST00000547637 SMIM7Q9BQ49 75 aa14.3□□□□□ -0.12
SMARCD1-204ENST00000547637 EIF5A2Q9GZV4 153 aaKnown RBP14.3□□□□□ -0.12
SMARCD1-204ENST00000547637 AMN1Q8IY45 258 aa14.29□□□□□ -0.12
SMARCD1-204ENST00000547637 TNXBP22105 4242 aa14.29□□□□□ -0.12
SMARCD1-204ENST00000547637 PPP1R2P9O14990 202 aa14.28□□□□□ -0.12
SMARCD1-204ENST00000547637 NUP35Q8NFH5 326 aa14.28□□□□□ -0.12
SMARCD1-204ENST00000547637 C2orf48Q96LS8 159 aa14.28□□□□□ -0.12
SMARCD1-204ENST00000547637 OSTCQ9NRP0 149 aa14.28□□□□□ -0.12
SMARCD1-204ENST00000547637 TRAV13-1A0A0B4J241 112 aa14.27□□□□□ -0.13
SMARCD1-204ENST00000547637 MT-ND6P03923 174 aa14.27□□□□□ -0.13
SMARCD1-204ENST00000547637 SUMO2P61956 95 aaKnown RBP14.27□□□□□ -0.13
SMARCD1-204ENST00000547637 ALKAL2Q6UX46 152 aa14.27□□□□□ -0.13
SMARCD1-204ENST00000547637 LINC01551Q86U37 167 aa14.27□□□□□ -0.13
SMARCD1-204ENST00000547637 ZNF727A8MUV8 499 aa14.26□□□□□ -0.13
SMARCD1-204ENST00000547637 RPL18AQ02543 176 aaKnown RBP14.25□□□□□ -0.13
SMARCD1-204ENST00000547637 UBE2D4Q9Y2X8 147 aa14.25□□□□□ -0.13
SMARCD1-204ENST00000547637 TCAPO15273 167 aa14.24□□□□□ -0.13
SMARCD1-204ENST00000547637 RNF151Q2KHN1 245 aa14.23□□□□□ -0.13
SMARCD1-204ENST00000547637 C9orf116Q5BN46 136 aaPredicted RBP14.23□□□□□ -0.13
SMARCD1-204ENST00000547637 C5orf38Q86SI9 138 aa14.23□□□□□ -0.13
SMARCD1-204ENST00000547637 LRP2P98164 4655 aa14.23□□□□□ -0.13
SMARCD1-204ENST00000547637 A0A1W2PNN7 141 aa14.22□□□□□ -0.13
SMARCD1-204ENST00000547637 SMKR1H3BMG3 65 aa14.22□□□□□ -0.13
SMARCD1-204ENST00000547637 ODF1Q14990 250 aa14.22□□□□□ -0.13
SMARCD1-204ENST00000547637 TIMM21Q9BVV7 248 aa14.22□□□□□ -0.13
SMARCD1-204ENST00000547637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.21□□□□□ -0.13
SMARCD1-204ENST00000547637 SPAG11BQ08648 103 aa14.21□□□□□ -0.13
SMARCD1-204ENST00000547637 RNASE13Q5GAN3 156 aaKnown RBP14.21□□□□□ -0.13
SMARCD1-204ENST00000547637 NAT8BQ9UHF3 227 aa14.21□□□□□ -0.13
SMARCD1-204ENST00000547637 PSORS1C2Q9UIG4 136 aa14.21□□□□□ -0.13
SMARCD1-204ENST00000547637 LINC00862A6NCI5 91 aa14.2□□□□□ -0.14
SMARCD1-204ENST00000547637 F8WDY8 70 aa14.2□□□□□ -0.14
SMARCD1-204ENST00000547637 C1orf137Q5JT78 98 aa14.2□□□□□ -0.14
SMARCD1-204ENST00000547637 OR10D4PQ8NGN7 298 aa14.2□□□□□ -0.14
SMARCD1-204ENST00000547637 IMMP2LQ96T52 175 aa14.2□□□□□ -0.14
SMARCD1-204ENST00000547637 AKAP14Q86UN6 197 aa14.19□□□□□ -0.14
SMARCD1-204ENST00000547637 NRACQ8N912 160 aa14.19□□□□□ -0.14
SMARCD1-204ENST00000547637 C20orf78Q9BR46 151 aa14.18□□□□□ -0.14
SMARCD1-204ENST00000547637 V9GYV3 84 aa14.18□□□□□ -0.14
SMARCD1-204ENST00000547637 TMEM241Q24JQ0 296 aa14.17□□□□□ -0.14
SMARCD1-204ENST00000547637 OPRPNQ99935 248 aaPredicted RBP14.17□□□□□ -0.14
SMARCD1-204ENST00000547637 CKS2P33552 79 aa14.16□□□□□ -0.14
SMARCD1-204ENST00000547637 FAM74A3Q4VXF1 159 aa14.16□□□□□ -0.14
SMARCD1-204ENST00000547637 FAM104BQ5XKR9 115 aa14.16□□□□□ -0.14
SMARCD1-204ENST00000547637 Q6ZUT4 128 aa14.16□□□□□ -0.14
SMARCD1-204ENST00000547637 MRPL35Q9NZE8 188 aaKnown RBP14.16□□□□□ -0.14
SMARCD1-204ENST00000547637 A0A1B0GW15 77 aa14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 NDUFA1O15239 70 aa14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 SRP19P09132 144 aaKnown RBP14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 MRPL51Q4U2R6 128 aaKnown RBP14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 PHF5AQ7RTV0 110 aaKnown RBP14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 ORAOV1Q8WV07 137 aa14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 DIRC1Q969H9 104 aa14.15□□□□□ -0.14
SMARCD1-204ENST00000547637 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
SMARCD1-204ENST00000547637 TRBV24-1A0A075B6N3 115 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms