RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
GCN1-203ENST00000547369 FAM210AQ96ND0 272 aa11.67□□□□□ -0.54
GCN1-203ENST00000547369 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
GCN1-203ENST00000547369 PKIGQ9Y2B9 76 aa11.67□□□□□ -0.54
GCN1-203ENST00000547369 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
GCN1-203ENST00000547369 SS18Q15532 418 aa11.66□□□□□ -0.54
GCN1-203ENST00000547369 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
GCN1-203ENST00000547369 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
GCN1-203ENST00000547369 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
GCN1-203ENST00000547369 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
GCN1-203ENST00000547369 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
GCN1-203ENST00000547369 TSKUQ8WUA8 353 aa11.65□□□□□ -0.54
GCN1-203ENST00000547369 LINC01600Q96MT4 127 aa11.65□□□□□ -0.54
GCN1-203ENST00000547369 CDC42SE2Q9NRR3 84 aa11.65□□□□□ -0.54
GCN1-203ENST00000547369 TRBV27A0A0K0K1C4 114 aa11.64□□□□□ -0.55
GCN1-203ENST00000547369 CD164L2Q6UWJ8 174 aa11.64□□□□□ -0.55
GCN1-203ENST00000547369 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
GCN1-203ENST00000547369 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
GCN1-203ENST00000547369 ZNF561-AS1K7EIQ3 104 aa11.63□□□□□ -0.55
GCN1-203ENST00000547369 RAB4AP20338 218 aa11.63□□□□□ -0.55
GCN1-203ENST00000547369 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
GCN1-203ENST00000547369 ZNF664Q8N3J9 261 aa11.63□□□□□ -0.55
GCN1-203ENST00000547369 SYCNQ0VAF6 134 aa11.62□□□□□ -0.55
GCN1-203ENST00000547369 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
GCN1-203ENST00000547369 TNXBP22105 4242 aa11.62□□□□□ -0.55
GCN1-203ENST00000547369 EIF5A2Q9GZV4 153 aaKnown RBP11.61□□□□□ -0.55
GCN1-203ENST00000547369 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
GCN1-203ENST00000547369 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
GCN1-203ENST00000547369 AKAP14Q86UN6 197 aa11.6□□□□□ -0.55
GCN1-203ENST00000547369 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
GCN1-203ENST00000547369 VCYO14598 125 aa11.59□□□□□ -0.55
GCN1-203ENST00000547369 CAMPP49913 170 aa11.59□□□□□ -0.55
GCN1-203ENST00000547369 A0A0J9YXV3 536 aa11.58□□□□□ -0.56
GCN1-203ENST00000547369 SMKR1H3BMG3 65 aa11.58□□□□□ -0.56
GCN1-203ENST00000547369 FCER1GP30273 86 aa11.58□□□□□ -0.56
GCN1-203ENST00000547369 RIGQ13278 110 aa11.58□□□□□ -0.56
GCN1-203ENST00000547369 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
GCN1-203ENST00000547369 CSDC2Q9Y534 153 aaKnown RBP11.58□□□□□ -0.56
GCN1-203ENST00000547369 IGLV4-69A0A075B6H9 119 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 C1orf196B1AJZ1 125 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 PPP1R17O96001 155 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 MALP21145 153 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 PTTG1IPP53801 180 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 REG3GQ6UW15 175 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 Q6ZRP5 223 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 V9GYV3 84 aa11.57□□□□□ -0.56
GCN1-203ENST00000547369 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 COX7A2LO14548 114 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 SRP19P09132 144 aaKnown RBP11.56□□□□□ -0.56
GCN1-203ENST00000547369 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
GCN1-203ENST00000547369 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 GAGE2BQ13066 116 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
GCN1-203ENST00000547369 NRACQ8N912 160 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 NUP35Q8NFH5 326 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 UBE2D4Q9Y2X8 147 aa11.56□□□□□ -0.56
GCN1-203ENST00000547369 ODF1Q14990 250 aa11.55□□□□□ -0.56
GCN1-203ENST00000547369 RNASE13Q5GAN3 156 aaKnown RBP11.55□□□□□ -0.56
GCN1-203ENST00000547369 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
GCN1-203ENST00000547369 KRTAP10-8P60410 259 aa11.54□□□□□ -0.56
GCN1-203ENST00000547369 CAMK2N2Q96S95 79 aa11.54□□□□□ -0.56
GCN1-203ENST00000547369 hCG_2014768A0A024R1R8 64 aa11.53□□□□□ -0.56
GCN1-203ENST00000547369 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
GCN1-203ENST00000547369 PPP1R2P9O14990 202 aa11.52□□□□□ -0.57
GCN1-203ENST00000547369 Q6ZUT4 128 aa11.52□□□□□ -0.57
GCN1-203ENST00000547369 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
GCN1-203ENST00000547369 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 APOMO95445 188 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
GCN1-203ENST00000547369 FAM104BQ5XKR9 115 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 TMEM18Q96B42 140 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 TIMM21Q9BVV7 248 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 LRP2P98164 4655 aa11.51□□□□□ -0.57
GCN1-203ENST00000547369 TMEM241Q24JQ0 296 aa11.5□□□□□ -0.57
GCN1-203ENST00000547369 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
GCN1-203ENST00000547369 RPL23P62829 140 aaKnown RBP11.49□□□□□ -0.57
GCN1-203ENST00000547369 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
GCN1-203ENST00000547369 LINC00862A6NCI5 91 aa11.48□□□□□ -0.57
GCN1-203ENST00000547369 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
GCN1-203ENST00000547369 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
GCN1-203ENST00000547369 C20orf78Q9BR46 151 aa11.48□□□□□ -0.57
GCN1-203ENST00000547369 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
GCN1-203ENST00000547369 SMIM27A0A1W2PRY6 76 aa11.47□□□□□ -0.57
GCN1-203ENST00000547369 RPL18AQ02543 176 aaKnown RBP11.47□□□□□ -0.57
GCN1-203ENST00000547369 ADIRFQ15847 76 aa11.47□□□□□ -0.57
GCN1-203ENST00000547369 CKS2P33552 79 aa11.46□□□□□ -0.57
GCN1-203ENST00000547369 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
GCN1-203ENST00000547369 RNF151Q2KHN1 245 aa11.46□□□□□ -0.57
GCN1-203ENST00000547369 OPRPNQ99935 248 aaPredicted RBP11.46□□□□□ -0.57
GCN1-203ENST00000547369 PSORS1C2Q9UIG4 136 aa11.46□□□□□ -0.57
GCN1-203ENST00000547369 A0A1B0GW15 77 aa11.45□□□□□ -0.58
GCN1-203ENST00000547369 TCAPO15273 167 aa11.45□□□□□ -0.58
GCN1-203ENST00000547369 MT-ND6P03923 174 aa11.45□□□□□ -0.58
GCN1-203ENST00000547369 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
GCN1-203ENST00000547369 OR10D4PQ8NGN7 298 aa11.45□□□□□ -0.58
GCN1-203ENST00000547369 NAT8Q9UHE5 227 aa11.45□□□□□ -0.58
GCN1-203ENST00000547369 TNFRSF6BO95407 300 aa11.44□□□□□ -0.58
GCN1-203ENST00000547369 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms