RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
CHPT1-202ENST00000546490 CCL25O15444 150 aa11.83□□□□□ -0.52
CHPT1-202ENST00000546490 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
CHPT1-202ENST00000546490 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
CHPT1-202ENST00000546490 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
CHPT1-202ENST00000546490 UBR4Q5T4S7 5183 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 hCG_2014768A0A024R1R8 64 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 C7orf77A4D0Y5 90 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 ZNF727A8MUV8 499 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 MT1HL1P0DM35 61 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 SS18Q15532 418 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
CHPT1-202ENST00000546490 STPG4Q8N801 248 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 OSTCQ9NRP0 149 aa11.81□□□□□ -0.52
CHPT1-202ENST00000546490 A0A096LNI7 61 aa11.8□□□□□ -0.52
CHPT1-202ENST00000546490 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
CHPT1-202ENST00000546490 LINC00474Q9P2X8 69 aa11.8□□□□□ -0.52
CHPT1-202ENST00000546490 RAB4AP20338 218 aa11.79□□□□□ -0.52
CHPT1-202ENST00000546490 POLR2KP53803 58 aaKnown RBP11.79□□□□□ -0.52
CHPT1-202ENST00000546490 AMN1Q8IY45 258 aa11.79□□□□□ -0.52
CHPT1-202ENST00000546490 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
CHPT1-202ENST00000546490 PRR3P79522 188 aaKnown RBP11.78□□□□□ -0.52
CHPT1-202ENST00000546490 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
CHPT1-202ENST00000546490 ZNF561-AS1K7EIQ3 104 aa11.77□□□□□ -0.53
CHPT1-202ENST00000546490 PPP1R17O96001 155 aa11.77□□□□□ -0.53
CHPT1-202ENST00000546490 FCER1GP30273 86 aa11.77□□□□□ -0.53
CHPT1-202ENST00000546490 SMAGPQ0VAQ4 97 aa11.77□□□□□ -0.53
CHPT1-202ENST00000546490 RIGQ13278 110 aa11.77□□□□□ -0.53
CHPT1-202ENST00000546490 ZNF664Q8N3J9 261 aa11.77□□□□□ -0.53
CHPT1-202ENST00000546490 SRP19P09132 144 aaKnown RBP11.76□□□□□ -0.53
CHPT1-202ENST00000546490 LINC00526Q96FQ7 95 aa11.76□□□□□ -0.53
CHPT1-202ENST00000546490 V9GYV3 84 aa11.76□□□□□ -0.53
CHPT1-202ENST00000546490 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
CHPT1-202ENST00000546490 VCYO14598 125 aa11.75□□□□□ -0.53
CHPT1-202ENST00000546490 NUP35Q8NFH5 326 aa11.75□□□□□ -0.53
CHPT1-202ENST00000546490 TNXBP22105 4242 aa11.75□□□□□ -0.53
CHPT1-202ENST00000546490 SUMO2P61956 95 aaKnown RBP11.74□□□□□ -0.53
CHPT1-202ENST00000546490 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
CHPT1-202ENST00000546490 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
CHPT1-202ENST00000546490 KIR2DL4Q99706 377 aa11.74□□□□□ -0.53
CHPT1-202ENST00000546490 NAT8BQ9UHF3 227 aa11.74□□□□□ -0.53
CHPT1-202ENST00000546490 C1orf196B1AJZ1 125 aa11.73□□□□□ -0.53
CHPT1-202ENST00000546490 PPP1R2P9O14990 202 aa11.73□□□□□ -0.53
CHPT1-202ENST00000546490 MALP21145 153 aa11.73□□□□□ -0.53
CHPT1-202ENST00000546490 CAMPP49913 170 aa11.73□□□□□ -0.53
CHPT1-202ENST00000546490 NRACQ8N912 160 aa11.73□□□□□ -0.53
CHPT1-202ENST00000546490 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
CHPT1-202ENST00000546490 COX7A2LO14548 114 aa11.72□□□□□ -0.53
CHPT1-202ENST00000546490 FAM74A3Q4VXF1 159 aa11.72□□□□□ -0.53
CHPT1-202ENST00000546490 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
CHPT1-202ENST00000546490 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.53
CHPT1-202ENST00000546490 RPL23P62829 140 aaKnown RBP11.7□□□□□ -0.54
CHPT1-202ENST00000546490 ADIRFQ15847 76 aa11.7□□□□□ -0.54
CHPT1-202ENST00000546490 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
CHPT1-202ENST00000546490 IGLV4-69A0A075B6H9 119 aa11.69□□□□□ -0.54
CHPT1-202ENST00000546490 LOC107984640A0A0U1RRK4 108 aa11.69□□□□□ -0.54
CHPT1-202ENST00000546490 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
CHPT1-202ENST00000546490 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
CHPT1-202ENST00000546490 TRAV13-1A0A0B4J241 112 aa11.68□□□□□ -0.54
CHPT1-202ENST00000546490 MRPL51Q4U2R6 128 aaKnown RBP11.68□□□□□ -0.54
CHPT1-202ENST00000546490 FAM104BQ5XKR9 115 aa11.68□□□□□ -0.54
CHPT1-202ENST00000546490 Q6ZUT4 128 aa11.68□□□□□ -0.54
CHPT1-202ENST00000546490 LINC01600Q96MT4 127 aa11.68□□□□□ -0.54
CHPT1-202ENST00000546490 NAT8Q9UHE5 227 aa11.68□□□□□ -0.54
CHPT1-202ENST00000546490 A0A1B0GW15 77 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 LINC00862A6NCI5 91 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 TCAPO15273 167 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 Q6ZRP5 223 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 CAMK2N2Q96S95 79 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 TIMM21Q9BVV7 248 aa11.67□□□□□ -0.54
CHPT1-202ENST00000546490 SMIM27A0A1W2PRY6 76 aa11.66□□□□□ -0.54
CHPT1-202ENST00000546490 APOMO95445 188 aa11.66□□□□□ -0.54
CHPT1-202ENST00000546490 GAGE2BQ13066 116 aa11.66□□□□□ -0.54
CHPT1-202ENST00000546490 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
CHPT1-202ENST00000546490 C20orf78Q9BR46 151 aa11.66□□□□□ -0.54
CHPT1-202ENST00000546490 CKS2P33552 79 aa11.65□□□□□ -0.54
CHPT1-202ENST00000546490 C2orf48Q96LS8 159 aa11.65□□□□□ -0.54
CHPT1-202ENST00000546490 TRBV24-1A0A075B6N3 115 aa11.64□□□□□ -0.55
CHPT1-202ENST00000546490 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
CHPT1-202ENST00000546490 A0A0J9YXV3 536 aa11.63□□□□□ -0.55
CHPT1-202ENST00000546490 S100A8P05109 93 aa11.63□□□□□ -0.55
CHPT1-202ENST00000546490 SPAG11BQ08648 103 aa11.63□□□□□ -0.55
CHPT1-202ENST00000546490 C5orf38Q86SI9 138 aa11.63□□□□□ -0.55
CHPT1-202ENST00000546490 TNFRSF6BO95407 300 aa11.62□□□□□ -0.55
CHPT1-202ENST00000546490 RPL18AQ02543 176 aaKnown RBP11.62□□□□□ -0.55
CHPT1-202ENST00000546490 PEA15Q15121 130 aa11.62□□□□□ -0.55
CHPT1-202ENST00000546490 OR10D4PQ8NGN7 298 aa11.62□□□□□ -0.55
CHPT1-202ENST00000546490 SMIM2Q9BVW6 85 aa11.62□□□□□ -0.55
CHPT1-202ENST00000546490 C9JQL5 133 aa11.61□□□□□ -0.55
CHPT1-202ENST00000546490 D6R8Y8 96 aa11.61□□□□□ -0.55
CHPT1-202ENST00000546490 F8W036 122 aa11.61□□□□□ -0.55
CHPT1-202ENST00000546490 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
CHPT1-202ENST00000546490 HBBP68871 147 aa11.61□□□□□ -0.55
CHPT1-202ENST00000546490 SMDT1Q9H4I9 107 aa11.61□□□□□ -0.55
CHPT1-202ENST00000546490 SPANXA1Q9NS26 97 aa11.61□□□□□ -0.55
CHPT1-202ENST00000546490 LRP2P98164 4655 aa11.6□□□□□ -0.55
CHPT1-202ENST00000546490 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
CHPT1-202ENST00000546490 MRPL54Q6P161 138 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms