RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 TMBIM6P55061 237 aa2.11□□□□□ -2.07
LRP6-207ENST00000545658 FLI1Q01543 452 aaPredicted RBP2.11□□□□□ -2.07
LRP6-207ENST00000545658 NEDD8Q15843 81 aa2.11□□□□□ -2.07
LRP6-207ENST00000545658 IAH1Q2TAA2 248 aaPredicted RBP2.11□□□□□ -2.07
LRP6-207ENST00000545658 KHDC3LQ587J8 217 aa2.11□□□□□ -2.07
LRP6-207ENST00000545658 PRNTQ86SH4 94 aa2.11□□□□□ -2.07
LRP6-207ENST00000545658 RSL24D1Q9UHA3 163 aaKnown RBP2.11□□□□□ -2.07
LRP6-207ENST00000545658 IGSF23A1L1A6 192 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 C9orf170A2RU37 121 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 C19orf71A6NCJ1 209 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 K7EQM0 130 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 M0R036 132 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 CCL25O15444 150 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 TCRAP04437 139 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 SULT1A1P50225 295 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 TAS2R45P59539 299 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 VBP1P61758 197 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 NCS1P62166 190 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 HBG1P69891 147 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 HBG2P69892 147 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 SAPCD1Q5SSQ6 148 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 LINC00242Q5T6M2 205 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 OR5A1Q8NGJ0 315 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 MCFD2Q8NI22 146 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 AP3S1Q92572 193 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 PGLYRP4Q96LB8 373 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 CAMK2N2Q96S95 79 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 MRPS26Q9BYN8 205 aaKnown RBP2.1□□□□□ -2.07
LRP6-207ENST00000545658 C11orf1Q9H5F2 150 aa2.1□□□□□ -2.07
LRP6-207ENST00000545658 IGLV8-61A0A075B6I0 122 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 TMSB15BA0A087X1C1 80 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 IGKV2D-26A0A0A0MRZ7 120 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 LINC00959A0A1B0GUT2 108 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 H3BMQ9 156 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 NUPR1O60356 82 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 ESDP10768 282 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 RPL12P30050 165 aaKnown RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 RPL28P46779 137 aaKnown RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 NKX2-5P52952 324 aaPredicted RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 NDUFV3P56181 108 aaKnown RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 IL18Q14116 193 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 ATP6V1FQ16864 119 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 FAM229BQ4G0N7 80 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 CD164L2Q6UWJ8 174 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 COX6B2Q6YFQ2 88 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 STX12Q86Y82 276 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 TMEM252Q8N6L7 170 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 C5orf17Q8NAS9 161 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 OR10AG1Q8NH19 301 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 SLC25A21Q9BQT8 299 aaPredicted RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 ZNF471Q9BX82 626 aaPredicted RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 KCNIP2Q9NS61 270 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 LSM5Q9Y4Y9 91 aaKnown RBP2.09□□□□□ -2.07
LRP6-207ENST00000545658 ARL2-SNX15V9GYD0 113 aa2.09□□□□□ -2.07
LRP6-207ENST00000545658 TRAV34A0A0B4J273 112 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 M0QY20 66 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 RGS5O15539 181 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 SH2D1AO60880 128 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 FAUP35544 74 aaKnown RBP2.08□□□□□ -2.08
LRP6-207ENST00000545658 CRIP1P50238 77 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 COTL1Q14019 142 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 PCOTHQ58A44 107 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 AMMECR1LQ6DCA0 310 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 RNASEKQ6P5S7 137 aaKnown RBP2.08□□□□□ -2.08
LRP6-207ENST00000545658 DAND5Q8N907 189 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 OR2D3Q8NGH3 330 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 IMMP2LQ96T52 175 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 KIR2DL4Q99706 377 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 LINC00846Q9NV44 126 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 RAB26Q9ULW5 256 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 EPDR1Q9UM22 224 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 UBE2D4Q9Y2X8 147 aa2.08□□□□□ -2.08
LRP6-207ENST00000545658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.07□□□□□ -2.08
LRP6-207ENST00000545658 MUC21A0A140T8X8 626 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 IGKV2-29A2NJV5 120 aaPredicted RBP2.07□□□□□ -2.08
LRP6-207ENST00000545658 C17orf112F2Z3M2 114 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 COX7A2LO14548 114 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 BCE1O60756 84 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 MGPP08493 103 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 TLX1NBP0CAT3 122 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 SMIM17P0DL12 118 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 PVALBP20472 110 aaPredicted RBP2.07□□□□□ -2.08
LRP6-207ENST00000545658 SPAG11BQ08648 103 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 SPANXN1Q5VSR9 72 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 Q86TA4 180 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 AP1S3Q96PC3 154 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 OCR1Q9BZK8 76 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 WDR61Q9GZS3 305 aaKnown RBP2.07□□□□□ -2.08
LRP6-207ENST00000545658 VCX3BQ9H321 246 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 SMDT1Q9H4I9 107 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 MRPL35Q9NZE8 188 aaKnown RBP2.07□□□□□ -2.08
LRP6-207ENST00000545658 KMT2DO14686 5537 aa2.07□□□□□ -2.08
LRP6-207ENST00000545658 G3V3Q6 166 aa2.06□□□□□ -2.08
LRP6-207ENST00000545658 SNAI2O43623 268 aa2.06□□□□□ -2.08
LRP6-207ENST00000545658 ZNF25P17030 456 aaPredicted RBP2.06□□□□□ -2.08
LRP6-207ENST00000545658 DEFA3P59666 94 aa2.06□□□□□ -2.08
LRP6-207ENST00000545658 AP3S2P59780 193 aa2.06□□□□□ -2.08
LRP6-207ENST00000545658 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
LRP6-207ENST00000545658 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms