RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TRBV27A0A0K0K1C4 114 aa13.4□□□□□ -0.26
SCARB1-210ENST00000545493 C9JQL5 133 aa13.39□□□□□ -0.27
SCARB1-210ENST00000545493 XCL1P47992 114 aa13.39□□□□□ -0.27
SCARB1-210ENST00000545493 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
SCARB1-210ENST00000545493 BTF3L4Q96K17 158 aa13.39□□□□□ -0.27
SCARB1-210ENST00000545493 LINC00959A0A1B0GUT2 108 aa13.38□□□□□ -0.27
SCARB1-210ENST00000545493 COX6A2Q02221 97 aa13.38□□□□□ -0.27
SCARB1-210ENST00000545493 MRPL52Q86TS9 123 aaKnown RBP13.38□□□□□ -0.27
SCARB1-210ENST00000545493 NRACQ8N912 160 aa13.38□□□□□ -0.27
SCARB1-210ENST00000545493 TMEM101Q96IK0 257 aa13.38□□□□□ -0.27
SCARB1-210ENST00000545493 C7orf77A4D0Y5 90 aa13.37□□□□□ -0.27
SCARB1-210ENST00000545493 CCL25O15444 150 aa13.37□□□□□ -0.27
SCARB1-210ENST00000545493 PLAC8Q9NZF1 115 aa13.37□□□□□ -0.27
SCARB1-210ENST00000545493 RIGQ13278 110 aa13.36□□□□□ -0.27
SCARB1-210ENST00000545493 ADIRFQ15847 76 aa13.36□□□□□ -0.27
SCARB1-210ENST00000545493 PRSS3P2Q8NHM4 247 aa13.36□□□□□ -0.27
SCARB1-210ENST00000545493 CDC42SE2Q9NRR3 84 aa13.36□□□□□ -0.27
SCARB1-210ENST00000545493 UBR4Q5T4S7 5183 aa13.36□□□□□ -0.27
SCARB1-210ENST00000545493 SRSF3P84103 164 aaKnown RBP13.35□□□□□ -0.27
SCARB1-210ENST00000545493 TMEM241Q24JQ0 296 aa13.35□□□□□ -0.27
SCARB1-210ENST00000545493 FAM74A3Q4VXF1 159 aa13.35□□□□□ -0.27
SCARB1-210ENST00000545493 NAT8BQ9UHF3 227 aa13.35□□□□□ -0.27
SCARB1-210ENST00000545493 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
SCARB1-210ENST00000545493 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
SCARB1-210ENST00000545493 NAT8Q9UHE5 227 aa13.33□□□□□ -0.28
SCARB1-210ENST00000545493 IGHV1-58A0A0C4DH39 117 aa13.32□□□□□ -0.28
SCARB1-210ENST00000545493 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
SCARB1-210ENST00000545493 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
SCARB1-210ENST00000545493 MRPL51Q4U2R6 128 aaKnown RBP13.32□□□□□ -0.28
SCARB1-210ENST00000545493 ZNF664Q8N3J9 261 aa13.32□□□□□ -0.28
SCARB1-210ENST00000545493 A0A096LNI7 61 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 VCYO14598 125 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 PHOX2AO14813 284 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 MAJINQ3KP22 176 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 FAM104BQ5XKR9 115 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 DPH3Q96FX2 82 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 UBE2D4Q9Y2X8 147 aa13.31□□□□□ -0.28
SCARB1-210ENST00000545493 FCER1GP30273 86 aa13.3□□□□□ -0.28
SCARB1-210ENST00000545493 SS18Q15532 418 aa13.3□□□□□ -0.28
SCARB1-210ENST00000545493 CD164L2Q6UWJ8 174 aa13.3□□□□□ -0.28
SCARB1-210ENST00000545493 PPP1R17O96001 155 aa13.29□□□□□ -0.28
SCARB1-210ENST00000545493 MT1HL1P0DM35 61 aa13.29□□□□□ -0.28
SCARB1-210ENST00000545493 RNASE13Q5GAN3 156 aaKnown RBP13.29□□□□□ -0.28
SCARB1-210ENST00000545493 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
SCARB1-210ENST00000545493 CARD19Q96LW7 228 aa13.29□□□□□ -0.28
SCARB1-210ENST00000545493 CAMPP49913 170 aa13.28□□□□□ -0.28
SCARB1-210ENST00000545493 Q6ZUT4 128 aa13.28□□□□□ -0.28
SCARB1-210ENST00000545493 PPP1R2P9O14990 202 aa13.27□□□□□ -0.29
SCARB1-210ENST00000545493 Q6ZRU5 148 aa13.27□□□□□ -0.29
SCARB1-210ENST00000545493 STPG4Q8N801 248 aa13.27□□□□□ -0.29
SCARB1-210ENST00000545493 KIR2DL4Q99706 377 aa13.27□□□□□ -0.29
SCARB1-210ENST00000545493 CSDC2Q9Y534 153 aaKnown RBP13.27□□□□□ -0.29
SCARB1-210ENST00000545493 PEA15Q15121 130 aa13.26□□□□□ -0.29
SCARB1-210ENST00000545493 C7orf33Q8WU49 177 aa13.26□□□□□ -0.29
SCARB1-210ENST00000545493 SMDT1Q9H4I9 107 aa13.25□□□□□ -0.29
SCARB1-210ENST00000545493 A0A1B0GW15 77 aa13.24□□□□□ -0.29
SCARB1-210ENST00000545493 A0A1B0GXF2 115 aa13.24□□□□□ -0.29
SCARB1-210ENST00000545493 PRR3P79522 188 aaKnown RBP13.24□□□□□ -0.29
SCARB1-210ENST00000545493 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
SCARB1-210ENST00000545493 C20orf78Q9BR46 151 aa13.24□□□□□ -0.29
SCARB1-210ENST00000545493 TRBV24-1A0A075B6N3 115 aa13.23□□□□□ -0.29
SCARB1-210ENST00000545493 LINC00862A6NCI5 91 aa13.23□□□□□ -0.29
SCARB1-210ENST00000545493 ZNF561-AS1K7EIQ3 104 aa13.23□□□□□ -0.29
SCARB1-210ENST00000545493 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
SCARB1-210ENST00000545493 TRAV13-1A0A0B4J241 112 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 C1orf196B1AJZ1 125 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 D6R8Y8 96 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 TNFRSF6BO95407 300 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 CKS2P33552 79 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 HBBP68871 147 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 SYCNQ0VAF6 134 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 SMIM2Q9BVW6 85 aa13.22□□□□□ -0.29
SCARB1-210ENST00000545493 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.29
SCARB1-210ENST00000545493 COX7A2LO14548 114 aa13.21□□□□□ -0.29
SCARB1-210ENST00000545493 RPL39P62891 51 aaKnown RBP13.21□□□□□ -0.29
SCARB1-210ENST00000545493 FAM104AQ969W3 186 aa13.21□□□□□ -0.29
SCARB1-210ENST00000545493 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.29
SCARB1-210ENST00000545493 PKIGQ9Y2B9 76 aa13.21□□□□□ -0.29
SCARB1-210ENST00000545493 NPYP01303 97 aa13.2□□□□□ -0.3
SCARB1-210ENST00000545493 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
SCARB1-210ENST00000545493 PLA2G2DQ9UNK4 145 aa13.2□□□□□ -0.3
SCARB1-210ENST00000545493 MALP21145 153 aa13.19□□□□□ -0.3
SCARB1-210ENST00000545493 TMEM18Q96B42 140 aa13.19□□□□□ -0.3
SCARB1-210ENST00000545493 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
SCARB1-210ENST00000545493 LRP2P98164 4655 aa13.18□□□□□ -0.3
SCARB1-210ENST00000545493 S100A8P05109 93 aa13.17□□□□□ -0.3
SCARB1-210ENST00000545493 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
SCARB1-210ENST00000545493 F8W036 122 aa13.16□□□□□ -0.3
SCARB1-210ENST00000545493 TCAPO15273 167 aa13.16□□□□□ -0.3
SCARB1-210ENST00000545493 CAMK2N2Q96S95 79 aa13.15□□□□□ -0.3
SCARB1-210ENST00000545493 OPRPNQ99935 248 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-210ENST00000545493 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
SCARB1-210ENST00000545493 SPAG11BQ08648 103 aa13.14□□□□□ -0.31
SCARB1-210ENST00000545493 GAGE2BQ13066 116 aa13.14□□□□□ -0.31
SCARB1-210ENST00000545493 ATP5L2Q7Z4Y8 100 aa13.14□□□□□ -0.31
SCARB1-210ENST00000545493 C2orf48Q96LS8 159 aa13.14□□□□□ -0.31
SCARB1-210ENST00000545493 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
SCARB1-210ENST00000545493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-210ENST00000545493 APOMO95445 188 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms