RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KCNRGQ8N5I3 272 aa8.79□□□□□ -1
RTN3-214ENST00000545432 TMEM101Q96IK0 257 aa8.79□□□□□ -1
RTN3-214ENST00000545432 BTF3L4Q96K17 158 aa8.79□□□□□ -1
RTN3-214ENST00000545432 CARHSP1Q9Y2V2 147 aaKnown RBP8.79□□□□□ -1
RTN3-214ENST00000545432 UMAD1C9J7I0 102 aa8.78□□□□□ -1
RTN3-214ENST00000545432 RPL13AP40429 203 aaKnown RBP8.78□□□□□ -1
RTN3-214ENST00000545432 EIF5AP63241 154 aaKnown RBP8.78□□□□□ -1
RTN3-214ENST00000545432 CENPWQ5EE01 88 aa8.78□□□□□ -1
RTN3-214ENST00000545432 EIF5AL1Q6IS14 154 aaKnown RBP8.78□□□□□ -1
RTN3-214ENST00000545432 TEX261Q6UWH6 196 aa8.78□□□□□ -1
RTN3-214ENST00000545432 TSKUQ8WUA8 353 aa8.78□□□□□ -1
RTN3-214ENST00000545432 TRAV1-1A0A0B4J248 108 aa8.77□□□□□ -1.01
RTN3-214ENST00000545432 I3L3M4 83 aa8.77□□□□□ -1.01
RTN3-214ENST00000545432 ARPC5O15511 151 aa8.77□□□□□ -1.01
RTN3-214ENST00000545432 CCL20P78556 96 aa8.77□□□□□ -1.01
RTN3-214ENST00000545432 RGS21Q2M5E4 152 aa8.77□□□□□ -1.01
RTN3-214ENST00000545432 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
RTN3-214ENST00000545432 C1orf196B1AJZ1 125 aa8.76□□□□□ -1.01
RTN3-214ENST00000545432 BCL2L11O43521 198 aa8.76□□□□□ -1.01
RTN3-214ENST00000545432 TWIST1Q15672 202 aa8.76□□□□□ -1.01
RTN3-214ENST00000545432 FAM213BQ8TBF2 198 aa8.76□□□□□ -1.01
RTN3-214ENST00000545432 A0A087WZ39 114 aa8.75□□□□□ -1.01
RTN3-214ENST00000545432 TSHBP01222 138 aa8.75□□□□□ -1.01
RTN3-214ENST00000545432 TRBV20OR9-2A0A075B6H5 130 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 A0A1B0GV50 99 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 RAB19A4D1S5 217 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 COX7A2LO14548 114 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 H2AFB1P0C5Y9 115 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 TLX1NBP0CAT3 122 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 PMCHP20382 165 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
RTN3-214ENST00000545432 NUDT10Q8NFP7 164 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 NUDT11Q96G61 164 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 BIN3Q9NQY0 253 aa8.74□□□□□ -1.01
RTN3-214ENST00000545432 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
RTN3-214ENST00000545432 F8WDY8 70 aa8.73□□□□□ -1.01
RTN3-214ENST00000545432 MALP21145 153 aa8.73□□□□□ -1.01
RTN3-214ENST00000545432 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
RTN3-214ENST00000545432 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
RTN3-214ENST00000545432 ZNF345Q14585 488 aa8.73□□□□□ -1.01
RTN3-214ENST00000545432 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
RTN3-214ENST00000545432 OPRPNQ99935 248 aaPredicted RBP8.73□□□□□ -1.01
RTN3-214ENST00000545432 MANBALQ9NQG1 85 aa8.73□□□□□ -1.01
RTN3-214ENST00000545432 MRPL35Q9NZE8 188 aaKnown RBP8.73□□□□□ -1.01
RTN3-214ENST00000545432 GNG4P50150 75 aa8.72□□□□□ -1.01
RTN3-214ENST00000545432 UBE2D1P51668 147 aa8.72□□□□□ -1.01
RTN3-214ENST00000545432 MRAP2Q96G30 205 aa8.72□□□□□ -1.01
RTN3-214ENST00000545432 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.02
RTN3-214ENST00000545432 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
RTN3-214ENST00000545432 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
RTN3-214ENST00000545432 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
RTN3-214ENST00000545432 RPP21Q9H633 154 aaKnown RBP8.7□□□□□ -1.02
RTN3-214ENST00000545432 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
RTN3-214ENST00000545432 KANTRA0A1W2PQU2 76 aa8.69□□□□□ -1.02
RTN3-214ENST00000545432 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
RTN3-214ENST00000545432 RNASE7Q9H1E1 156 aaKnown RBP8.69□□□□□ -1.02
RTN3-214ENST00000545432 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 HMSDA8MTL9 139 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 TMEM241Q24JQ0 296 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 SMIM15Q7Z3B0 74 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 ST20Q9HBF5 79 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 GNG13Q9P2W3 67 aa8.68□□□□□ -1.02
RTN3-214ENST00000545432 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
RTN3-214ENST00000545432 PDE6DO43924 150 aa8.67□□□□□ -1.02
RTN3-214ENST00000545432 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
RTN3-214ENST00000545432 ZNF861PO60384 105 aa8.66□□□□□ -1.02
RTN3-214ENST00000545432 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
RTN3-214ENST00000545432 K7EN84 100 aa8.65□□□□□ -1.02
RTN3-214ENST00000545432 TSPAN13O95857 204 aa8.65□□□□□ -1.02
RTN3-214ENST00000545432 C10orf25Q5T742 122 aa8.65□□□□□ -1.02
RTN3-214ENST00000545432 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
RTN3-214ENST00000545432 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
RTN3-214ENST00000545432 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
RTN3-214ENST00000545432 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
RTN3-214ENST00000545432 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
RTN3-214ENST00000545432 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
RTN3-214ENST00000545432 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
RTN3-214ENST00000545432 C6orf48Q9UBA6 75 aa8.64□□□□□ -1.03
RTN3-214ENST00000545432 NDUFA1O15239 70 aa8.63□□□□□ -1.03
RTN3-214ENST00000545432 SMAGPQ0VAQ4 97 aa8.63□□□□□ -1.03
RTN3-214ENST00000545432 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
RTN3-214ENST00000545432 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
RTN3-214ENST00000545432 A0A087X002 238 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 M0QXV9 152 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 VCYO14598 125 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 RAB4AP20338 218 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 CRCT1Q9UGL9 99 aa8.62□□□□□ -1.03
RTN3-214ENST00000545432 UBE2BP63146 152 aa8.61□□□□□ -1.03
RTN3-214ENST00000545432 KIAA0087Q14695 138 aa8.61□□□□□ -1.03
RTN3-214ENST00000545432 RNASE13Q5GAN3 156 aaKnown RBP8.61□□□□□ -1.03
RTN3-214ENST00000545432 FSIP2Q5CZC0 6907 aa8.6□□□□□ -1.03
RTN3-214ENST00000545432 Q6ZUT4 128 aa8.6□□□□□ -1.03
RTN3-214ENST00000545432 FAM231DQ6ZW35 169 aa8.6□□□□□ -1.03
RTN3-214ENST00000545432 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
RTN3-214ENST00000545432 A8MWL6 223 aa8.59□□□□□ -1.03
RTN3-214ENST00000545432 GAGE2EQ4V326 116 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms