RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 CLRN3Q8NCR9 226 aa14.24□□□□□ -0.13
OTUB1-212ENST00000543988 KRTAP17-1Q9BYP8 105 aa14.24□□□□□ -0.13
OTUB1-212ENST00000543988 RHEBQ15382 184 aa14.23□□□□□ -0.13
OTUB1-212ENST00000543988 LINC01620Q4KN68 170 aa14.23□□□□□ -0.13
OTUB1-212ENST00000543988 CHCHD10Q8WYQ3 142 aaPredicted RBP14.23□□□□□ -0.13
OTUB1-212ENST00000543988 GAGE12HA6NDE8 117 aa14.22□□□□□ -0.13
OTUB1-212ENST00000543988 TCAPO15273 167 aa14.22□□□□□ -0.13
OTUB1-212ENST00000543988 PRSS1P07477 247 aa14.22□□□□□ -0.13
OTUB1-212ENST00000543988 CDC42SE2Q9NRR3 84 aa14.22□□□□□ -0.13
OTUB1-212ENST00000543988 LAMTOR2Q9Y2Q5 125 aa14.22□□□□□ -0.13
OTUB1-212ENST00000543988 UBE2D4Q9Y2X8 147 aa14.22□□□□□ -0.13
OTUB1-212ENST00000543988 S100PP25815 95 aa14.21□□□□□ -0.13
OTUB1-212ENST00000543988 XGP55808 180 aa14.21□□□□□ -0.13
OTUB1-212ENST00000543988 ZNF664Q8N3J9 261 aa14.21□□□□□ -0.13
OTUB1-212ENST00000543988 RPS10P5Q9NQ39 176 aa14.21□□□□□ -0.13
OTUB1-212ENST00000543988 DNAH8Q96JB1 4490 aa14.21□□□□□ -0.14
OTUB1-212ENST00000543988 RPL39P62891 51 aaKnown RBP14.2□□□□□ -0.14
OTUB1-212ENST00000543988 DGAT2L7PQ6IED9 249 aa14.2□□□□□ -0.14
OTUB1-212ENST00000543988 LINC00959A0A1B0GUT2 108 aa14.19□□□□□ -0.14
OTUB1-212ENST00000543988 HAMPP81172 84 aa14.19□□□□□ -0.14
OTUB1-212ENST00000543988 SMAGPQ0VAQ4 97 aa14.19□□□□□ -0.14
OTUB1-212ENST00000543988 MAP1LC3AQ9H492 121 aa14.19□□□□□ -0.14
OTUB1-212ENST00000543988 CSDC2Q9Y534 153 aaKnown RBP14.19□□□□□ -0.14
OTUB1-212ENST00000543988 LOC389332A0A1B0GUA5 103 aa14.18□□□□□ -0.14
OTUB1-212ENST00000543988 RNASE13Q5GAN3 156 aaKnown RBP14.18□□□□□ -0.14
OTUB1-212ENST00000543988 Q6ZUT4 128 aa14.18□□□□□ -0.14
OTUB1-212ENST00000543988 TMEM18Q96B42 140 aa14.18□□□□□ -0.14
OTUB1-212ENST00000543988 TIMM21Q9BVV7 248 aa14.18□□□□□ -0.14
OTUB1-212ENST00000543988 FAM30AQ9NZY2 134 aa14.18□□□□□ -0.14
OTUB1-212ENST00000543988 PRSS47A8MTI9 375 aa14.17□□□□□ -0.14
OTUB1-212ENST00000543988 APOC3P02656 99 aa14.17□□□□□ -0.14
OTUB1-212ENST00000543988 XCL1P47992 114 aa14.17□□□□□ -0.14
OTUB1-212ENST00000543988 CCL25O15444 150 aa14.16□□□□□ -0.14
OTUB1-212ENST00000543988 RAB5AP20339 215 aa14.16□□□□□ -0.14
OTUB1-212ENST00000543988 FOXI1Q12951 378 aa14.16□□□□□ -0.14
OTUB1-212ENST00000543988 C15orf56Q8N910 161 aa14.16□□□□□ -0.14
OTUB1-212ENST00000543988 ABCA13Q86UQ4 5058 aa14.16□□□□□ -0.14
OTUB1-212ENST00000543988 PCLOQ9Y6V0 5065 aa14.16□□□□□ -0.14
OTUB1-212ENST00000543988 hDV102S1A0JD36 115 aa14.15□□□□□ -0.14
OTUB1-212ENST00000543988 KIAA1644Q3SXP7 199 aa14.15□□□□□ -0.14
OTUB1-212ENST00000543988 KRTAP4-5Q9BYR2 181 aa14.15□□□□□ -0.14
OTUB1-212ENST00000543988 NDUFA5Q16718 116 aa14.14□□□□□ -0.15
OTUB1-212ENST00000543988 Q6ZSA8 131 aa14.14□□□□□ -0.15
OTUB1-212ENST00000543988 Q8N1X5 172 aa14.14□□□□□ -0.15
OTUB1-212ENST00000543988 Q8N8P6 123 aa14.14□□□□□ -0.15
OTUB1-212ENST00000543988 GNB1LQ9BYB4 327 aa14.14□□□□□ -0.15
OTUB1-212ENST00000543988 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
OTUB1-212ENST00000543988 SS18Q15532 418 aa14.13□□□□□ -0.15
OTUB1-212ENST00000543988 SVBPQ8N300 66 aa14.13□□□□□ -0.15
OTUB1-212ENST00000543988 FAM104AQ969W3 186 aa14.13□□□□□ -0.15
OTUB1-212ENST00000543988 OPRPNQ99935 248 aaPredicted RBP14.12□□□□□ -0.15
OTUB1-212ENST00000543988 TRAV13-1A0A0B4J241 112 aa14.11□□□□□ -0.15
OTUB1-212ENST00000543988 SNAPINO95295 136 aa14.11□□□□□ -0.15
OTUB1-212ENST00000543988 FAT1Q14517 4588 aa14.1□□□□□ -0.15
OTUB1-212ENST00000543988 CNBPP62633 177 aaKnown RBP14.1□□□□□ -0.15
OTUB1-212ENST00000543988 HIGD2BQ4VC39 106 aa14.1□□□□□ -0.15
OTUB1-212ENST00000543988 CFAP161Q6P656 301 aa14.1□□□□□ -0.15
OTUB1-212ENST00000543988 CD164L2Q6UWJ8 174 aa14.1□□□□□ -0.15
OTUB1-212ENST00000543988 SLPIP03973 132 aa14.09□□□□□ -0.15
OTUB1-212ENST00000543988 MRPS36P82909 103 aaKnown RBP14.09□□□□□ -0.15
OTUB1-212ENST00000543988 NXT2Q9NPJ8 142 aaKnown RBP14.09□□□□□ -0.15
OTUB1-212ENST00000543988 GVQW2A0A096LPI5 108 aaPredicted RBP14.08□□□□□ -0.16
OTUB1-212ENST00000543988 TGIF2-C20orf24A0A0A6YYL0 155 aa14.08□□□□□ -0.16
OTUB1-212ENST00000543988 C1orf196B1AJZ1 125 aa14.08□□□□□ -0.16
OTUB1-212ENST00000543988 MT-ND6P03923 174 aa14.08□□□□□ -0.16
OTUB1-212ENST00000543988 IFI27P40305 119 aaPredicted RBP14.08□□□□□ -0.16
OTUB1-212ENST00000543988 COX19Q49B96 90 aa14.08□□□□□ -0.16
OTUB1-212ENST00000543988 C9orf163Q8N9P6 203 aa14.08□□□□□ -0.16
OTUB1-212ENST00000543988 AP5S1Q9NUS5 200 aa14.08□□□□□ -0.16
OTUB1-212ENST00000543988 MRPL18Q9H0U6 180 aaKnown RBP14.07□□□□□ -0.16
OTUB1-212ENST00000543988 ORMDL2Q53FV1 153 aa14.06□□□□□ -0.16
OTUB1-212ENST00000543988 ALKBH7Q9BT30 221 aaPredicted RBP14.06□□□□□ -0.16
OTUB1-212ENST00000543988 CYSLTR1Q9Y271 337 aa14.06□□□□□ -0.16
OTUB1-212ENST00000543988 PYGO1Q9Y3Y4 419 aa14.06□□□□□ -0.16
OTUB1-212ENST00000543988 IGLV4-3A0A075B6K6 122 aa14.05□□□□□ -0.16
OTUB1-212ENST00000543988 K7EMI3 77 aa14.05□□□□□ -0.16
OTUB1-212ENST00000543988 SMR3BP02814 79 aaPredicted RBP14.05□□□□□ -0.16
OTUB1-212ENST00000543988 C2orf66Q6UXQ4 117 aa14.05□□□□□ -0.16
OTUB1-212ENST00000543988 IGHV1-58A0A0C4DH39 117 aa14.04□□□□□ -0.16
OTUB1-212ENST00000543988 IFITM10A6NMD0 228 aa14.04□□□□□ -0.16
OTUB1-212ENST00000543988 FABP9Q0Z7S8 132 aa14.04□□□□□ -0.16
OTUB1-212ENST00000543988 SCXQ7RTU7 201 aa14.04□□□□□ -0.16
OTUB1-212ENST00000543988 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.03□□□□□ -0.16
OTUB1-212ENST00000543988 COX7A2LO14548 114 aa14.03□□□□□ -0.16
OTUB1-212ENST00000543988 SLC7A5P1Q8MH63 180 aa14.02□□□□□ -0.17
OTUB1-212ENST00000543988 CHAC1Q9BUX1 264 aa14.02□□□□□ -0.17
OTUB1-212ENST00000543988 EPM2AB3EWF7 344 aa14.01□□□□□ -0.17
OTUB1-212ENST00000543988 SDIM1Q6ZPB5 146 aa14.01□□□□□ -0.17
OTUB1-212ENST00000543988 LINC00526Q96FQ7 95 aa14.01□□□□□ -0.17
OTUB1-212ENST00000543988 TMEM141Q96I45 108 aa14.01□□□□□ -0.17
OTUB1-212ENST00000543988 MALP21145 153 aa14□□□□□ -0.17
OTUB1-212ENST00000543988 Q5VSD8 79 aa14□□□□□ -0.17
OTUB1-212ENST00000543988 C5orf38Q86SI9 138 aa14□□□□□ -0.17
OTUB1-212ENST00000543988 PRSS3P2Q8NHM4 247 aa14□□□□□ -0.17
OTUB1-212ENST00000543988 IGHV3-64A0A075B6Q5 118 aa13.99□□□□□ -0.17
OTUB1-212ENST00000543988 YPEL4Q96NS1 127 aa13.99□□□□□ -0.17
OTUB1-212ENST00000543988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.99□□□□□ -0.17
OTUB1-212ENST00000543988 IGIPA6NJ69 53 aa13.98□□□□□ -0.17
OTUB1-212ENST00000543988 PANO1I0J062 215 aa13.98□□□□□ -0.17
OTUB1-212ENST00000543988 CIRBP-AS1Q8TBR5 109 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms