RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 CDC42SE2Q9NRR3 84 aa10.2□□□□□ -0.78
SCNN1A-220ENST00000543585 MYCBP2O75592 4640 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 FOXI1Q12951 378 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 ANAPC16Q96DE5 110 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
SCNN1A-220ENST00000543585 LINC00959A0A1B0GUT2 108 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 F8W036 122 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 S100A8P05109 93 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 FCER1GP30273 86 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 RPL32P62910 135 aaKnown RBP10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 CLRN3Q8NCR9 226 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 BTF3L4Q96K17 158 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 UBE2D4Q9Y2X8 147 aa10.18□□□□□ -0.78
SCNN1A-220ENST00000543585 PANO1I0J062 215 aa10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 MT-ND4LP03901 98 aa10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 CNBPP62633 177 aaKnown RBP10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 KIR2DL4Q99706 377 aa10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 SMIM2Q9BVW6 85 aa10.17□□□□□ -0.78
SCNN1A-220ENST00000543585 TMEM218A2RU14 115 aa10.16□□□□□ -0.78
SCNN1A-220ENST00000543585 RNASE13Q5GAN3 156 aaKnown RBP10.16□□□□□ -0.78
SCNN1A-220ENST00000543585 UQCC3Q6UW78 93 aa10.16□□□□□ -0.78
SCNN1A-220ENST00000543585 ZNF664Q8N3J9 261 aa10.16□□□□□ -0.78
SCNN1A-220ENST00000543585 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
SCNN1A-220ENST00000543585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
SCNN1A-220ENST00000543585 CCL25O15444 150 aa10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 XCL1P47992 114 aa10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 RPL39P62891 51 aaKnown RBP10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 HIGD2BQ4VC39 106 aa10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 SDIM1Q6ZPB5 146 aa10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 LINC00528Q8N1L1 170 aa10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 CSDC2Q9Y534 153 aaKnown RBP10.15□□□□□ -0.78
SCNN1A-220ENST00000543585 FAM229AH3BQW9 127 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 PHOX2AO14813 284 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 TCAPO15273 167 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 PPBPP02775 128 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 Q6ZUT4 128 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 ORMDL3Q8N138 153 aa10.14□□□□□ -0.79
SCNN1A-220ENST00000543585 TMEM136Q6ZRR5 245 aa10.13□□□□□ -0.79
SCNN1A-220ENST00000543585 PRELID3AQ96N28 172 aa10.13□□□□□ -0.79
SCNN1A-220ENST00000543585 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
SCNN1A-220ENST00000543585 KRTAP10-4P60372 401 aaPredicted RBP10.12□□□□□ -0.79
SCNN1A-220ENST00000543585 COMMD7Q86VX2 200 aa10.12□□□□□ -0.79
SCNN1A-220ENST00000543585 TIMM21Q9BVV7 248 aa10.12□□□□□ -0.79
SCNN1A-220ENST00000543585 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
SCNN1A-220ENST00000543585 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
SCNN1A-220ENST00000543585 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
SCNN1A-220ENST00000543585 PRSS47A8MTI9 375 aa10.1□□□□□ -0.79
SCNN1A-220ENST00000543585 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
SCNN1A-220ENST00000543585 SS18Q15532 418 aa10.1□□□□□ -0.79
SCNN1A-220ENST00000543585 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
SCNN1A-220ENST00000543585 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
SCNN1A-220ENST00000543585 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
SCNN1A-220ENST00000543585 IGHV3-64A0A075B6Q5 118 aa10.09□□□□□ -0.79
SCNN1A-220ENST00000543585 CIRBPQ14011 172 aaKnown RBP10.09□□□□□ -0.79
SCNN1A-220ENST00000543585 IMMP2LQ96T52 175 aa10.09□□□□□ -0.79
SCNN1A-220ENST00000543585 HERC1Q15751 4861 aa10.08□□□□□ -0.8
SCNN1A-220ENST00000543585 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
SCNN1A-220ENST00000543585 LOC389332A0A1B0GUA5 103 aa10.08□□□□□ -0.8
SCNN1A-220ENST00000543585 C10orf91Q5T1B1 145 aa10.08□□□□□ -0.8
SCNN1A-220ENST00000543585 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
SCNN1A-220ENST00000543585 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 C1orf196B1AJZ1 125 aa10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 SMAGPQ0VAQ4 97 aa10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 CTDSP1Q9GZU7 261 aa10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 LAMTOR2Q9Y2Q5 125 aa10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
SCNN1A-220ENST00000543585 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
SCNN1A-220ENST00000543585 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
SCNN1A-220ENST00000543585 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
SCNN1A-220ENST00000543585 MAP1LC3AQ9H492 121 aa10.06□□□□□ -0.8
SCNN1A-220ENST00000543585 SPANXA1Q9NS26 97 aa10.06□□□□□ -0.8
SCNN1A-220ENST00000543585 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
SCNN1A-220ENST00000543585 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
SCNN1A-220ENST00000543585 MRPS36P82909 103 aaKnown RBP10.05□□□□□ -0.8
SCNN1A-220ENST00000543585 COX6A2Q02221 97 aa10.05□□□□□ -0.8
SCNN1A-220ENST00000543585 KIAA1644Q3SXP7 199 aa10.05□□□□□ -0.8
SCNN1A-220ENST00000543585 Q8N8P6 123 aa10.05□□□□□ -0.8
SCNN1A-220ENST00000543585 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
SCNN1A-220ENST00000543585 CARHSP1Q9Y2V2 147 aaKnown RBP10.04□□□□□ -0.8
SCNN1A-220ENST00000543585 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
SCNN1A-220ENST00000543585 COX7A2LO14548 114 aa10.03□□□□□ -0.8
SCNN1A-220ENST00000543585 RAB5AP20339 215 aa10.03□□□□□ -0.8
SCNN1A-220ENST00000543585 TRAV9-1A0A075B6T8 112 aa10.02□□□□□ -0.81
SCNN1A-220ENST00000543585 A0A087WYN8 130 aa10.02□□□□□ -0.81
SCNN1A-220ENST00000543585 PYGO1Q9Y3Y4 419 aa10.02□□□□□ -0.81
SCNN1A-220ENST00000543585 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
SCNN1A-220ENST00000543585 A0A096LNI7 61 aa10.01□□□□□ -0.81
SCNN1A-220ENST00000543585 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
SCNN1A-220ENST00000543585 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
SCNN1A-220ENST00000543585 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
SCNN1A-220ENST00000543585 IFITM10A6NMD0 228 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms