RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
ECHDC2-223ENST00000542552 BTF3L4Q96K17 158 aa10.02□□□□□ -0.81
ECHDC2-223ENST00000542552 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
ECHDC2-223ENST00000542552 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
ECHDC2-223ENST00000542552 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
ECHDC2-223ENST00000542552 PHOX2AO14813 284 aa10.01□□□□□ -0.81
ECHDC2-223ENST00000542552 PPBPP02775 128 aa10.01□□□□□ -0.81
ECHDC2-223ENST00000542552 SMR3BP02814 79 aaPredicted RBP10.01□□□□□ -0.81
ECHDC2-223ENST00000542552 FCER1GP30273 86 aa10.01□□□□□ -0.81
ECHDC2-223ENST00000542552 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
ECHDC2-223ENST00000542552 IGKV3OR2-268A0A0C4DH90 116 aa10□□□□□ -0.81
ECHDC2-223ENST00000542552 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
ECHDC2-223ENST00000542552 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
ECHDC2-223ENST00000542552 LINC00959A0A1B0GUT2 108 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 NPYP01303 97 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 Q5VSD8 79 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 ZNF664Q8N3J9 261 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 SMIM2Q9BVW6 85 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
ECHDC2-223ENST00000542552 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 TCAPO15273 167 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 FOXI1Q12951 378 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 IMMP2LQ96T52 175 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
ECHDC2-223ENST00000542552 SLPIP03973 132 aa9.97□□□□□ -0.81
ECHDC2-223ENST00000542552 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
ECHDC2-223ENST00000542552 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
ECHDC2-223ENST00000542552 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
ECHDC2-223ENST00000542552 PRSS47A8MTI9 375 aa9.96□□□□□ -0.82
ECHDC2-223ENST00000542552 SMAGPQ0VAQ4 97 aa9.96□□□□□ -0.82
ECHDC2-223ENST00000542552 CFAP161Q6P656 301 aa9.96□□□□□ -0.82
ECHDC2-223ENST00000542552 COMMD7Q86VX2 200 aa9.96□□□□□ -0.82
ECHDC2-223ENST00000542552 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
ECHDC2-223ENST00000542552 MYCBP2O75592 4640 aa9.96□□□□□ -0.82
ECHDC2-223ENST00000542552 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 CCL25O15444 150 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 C10orf91Q5T1B1 145 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 SDIM1Q6ZPB5 146 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 CTDSP1Q9GZU7 261 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 LAMTOR2Q9Y2Q5 125 aa9.95□□□□□ -0.82
ECHDC2-223ENST00000542552 XCL1P47992 114 aa9.94□□□□□ -0.82
ECHDC2-223ENST00000542552 SS18Q15532 418 aa9.94□□□□□ -0.82
ECHDC2-223ENST00000542552 CIRBP-AS1Q8TBR5 109 aa9.94□□□□□ -0.82
ECHDC2-223ENST00000542552 FAM104AQ969W3 186 aa9.94□□□□□ -0.82
ECHDC2-223ENST00000542552 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
ECHDC2-223ENST00000542552 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
ECHDC2-223ENST00000542552 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
ECHDC2-223ENST00000542552 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
ECHDC2-223ENST00000542552 TRAV9-1A0A075B6T8 112 aa9.92□□□□□ -0.82
ECHDC2-223ENST00000542552 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
ECHDC2-223ENST00000542552 C1orf196B1AJZ1 125 aa9.92□□□□□ -0.82
ECHDC2-223ENST00000542552 Q6ZUT4 128 aa9.92□□□□□ -0.82
ECHDC2-223ENST00000542552 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
ECHDC2-223ENST00000542552 RNASE13Q5GAN3 156 aaKnown RBP9.91□□□□□ -0.82
ECHDC2-223ENST00000542552 LINC00528Q8N1L1 170 aa9.91□□□□□ -0.82
ECHDC2-223ENST00000542552 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
ECHDC2-223ENST00000542552 IGHV3-64A0A075B6Q5 118 aa9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 PANO1I0J062 215 aa9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 MRPS36P82909 103 aaKnown RBP9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.9□□□□□ -0.82
ECHDC2-223ENST00000542552 RAB5AP20339 215 aa9.89□□□□□ -0.83
ECHDC2-223ENST00000542552 Q8N8P6 123 aa9.89□□□□□ -0.83
ECHDC2-223ENST00000542552 TRAV13-1A0A0B4J241 112 aa9.88□□□□□ -0.83
ECHDC2-223ENST00000542552 LOC389332A0A1B0GUA5 103 aa9.88□□□□□ -0.83
ECHDC2-223ENST00000542552 PYGO1Q9Y3Y4 419 aa9.88□□□□□ -0.83
ECHDC2-223ENST00000542552 OPRPNQ99935 248 aaPredicted RBP9.87□□□□□ -0.83
ECHDC2-223ENST00000542552 K7EMI3 77 aa9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 COX7A2LO14548 114 aa9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 PLA2G1BP04054 148 aaKnown RBP9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 S100PP25815 95 aa9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 KRTAP10-4P60372 401 aaPredicted RBP9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 RHEBQ15382 184 aa9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 FLG2Q5D862 2391 aaPredicted RBP9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 PKHD1L1Q86WI1 4243 aa9.86□□□□□ -0.83
ECHDC2-223ENST00000542552 HERC1Q15751 4861 aa9.85□□□□□ -0.83
ECHDC2-223ENST00000542552 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
ECHDC2-223ENST00000542552 IGLV4-3A0A075B6K6 122 aa9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 IFI27P40305 119 aaPredicted RBP9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 COX6A2Q02221 97 aa9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 KIAA1644Q3SXP7 199 aa9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 NXT2Q9NPJ8 142 aaKnown RBP9.84□□□□□ -0.83
ECHDC2-223ENST00000542552 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
ECHDC2-223ENST00000542552 CHTF8P0CG12 524 aa9.83□□□□□ -0.84
ECHDC2-223ENST00000542552 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
ECHDC2-223ENST00000542552 C5orf38Q86SI9 138 aa9.83□□□□□ -0.84
ECHDC2-223ENST00000542552 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
ECHDC2-223ENST00000542552 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
ECHDC2-223ENST00000542552 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms