RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ZNF25P17030 456 aaPredicted RBP12.4□□□□□ -0.42
DDX11-220ENST00000542244 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
DDX11-220ENST00000542244 TEX261Q6UWH6 196 aa12.4□□□□□ -0.42
DDX11-220ENST00000542244 CDC42SE2Q9NRR3 84 aa12.4□□□□□ -0.42
DDX11-220ENST00000542244 CT83Q5H943 113 aa12.39□□□□□ -0.43
DDX11-220ENST00000542244 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
DDX11-220ENST00000542244 TSKUQ8WUA8 353 aa12.39□□□□□ -0.43
DDX11-220ENST00000542244 RNASE13Q5GAN3 156 aaKnown RBP12.38□□□□□ -0.43
DDX11-220ENST00000542244 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
DDX11-220ENST00000542244 SMIM7Q9BQ49 75 aa12.38□□□□□ -0.43
DDX11-220ENST00000542244 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
DDX11-220ENST00000542244 A0A1B0GUT8 65 aa12.37□□□□□ -0.43
DDX11-220ENST00000542244 SRP19P09132 144 aaKnown RBP12.37□□□□□ -0.43
DDX11-220ENST00000542244 MRPL52Q86TS9 123 aaKnown RBP12.37□□□□□ -0.43
DDX11-220ENST00000542244 AKAP14Q86UN6 197 aa12.37□□□□□ -0.43
DDX11-220ENST00000542244 MRAP2Q96G30 205 aa12.37□□□□□ -0.43
DDX11-220ENST00000542244 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
DDX11-220ENST00000542244 IGHV1-58A0A0C4DH39 117 aa12.36□□□□□ -0.43
DDX11-220ENST00000542244 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
DDX11-220ENST00000542244 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
DDX11-220ENST00000542244 NRACQ8N912 160 aa12.36□□□□□ -0.43
DDX11-220ENST00000542244 V9GYV3 84 aa12.36□□□□□ -0.43
DDX11-220ENST00000542244 CARD19Q96LW7 228 aa12.35□□□□□ -0.43
DDX11-220ENST00000542244 LINC01600Q96MT4 127 aa12.35□□□□□ -0.43
DDX11-220ENST00000542244 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
DDX11-220ENST00000542244 OSTCQ9NRP0 149 aa12.35□□□□□ -0.43
DDX11-220ENST00000542244 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
DDX11-220ENST00000542244 CD164L2Q6UWJ8 174 aa12.34□□□□□ -0.43
DDX11-220ENST00000542244 NUP35Q8NFH5 326 aa12.34□□□□□ -0.43
DDX11-220ENST00000542244 LRP2P98164 4655 aa12.34□□□□□ -0.43
DDX11-220ENST00000542244 C7orf77A4D0Y5 90 aa12.33□□□□□ -0.44
DDX11-220ENST00000542244 SYCNQ0VAF6 134 aa12.33□□□□□ -0.44
DDX11-220ENST00000542244 SS18Q15532 418 aa12.33□□□□□ -0.44
DDX11-220ENST00000542244 BORCS7Q96B45 105 aa12.33□□□□□ -0.44
DDX11-220ENST00000542244 FAM210AQ96ND0 272 aa12.33□□□□□ -0.44
DDX11-220ENST00000542244 IGLV4-69A0A075B6H9 119 aa12.32□□□□□ -0.44
DDX11-220ENST00000542244 C9JQL5 133 aa12.32□□□□□ -0.44
DDX11-220ENST00000542244 UBE2D4Q9Y2X8 147 aa12.32□□□□□ -0.44
DDX11-220ENST00000542244 A0A1W2PNN7 141 aa12.31□□□□□ -0.44
DDX11-220ENST00000542244 CAMPP49913 170 aa12.3□□□□□ -0.44
DDX11-220ENST00000542244 SRSF9Q13242 221 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDX11-220ENST00000542244 Q6ZUT4 128 aa12.3□□□□□ -0.44
DDX11-220ENST00000542244 FAM104AQ969W3 186 aa12.3□□□□□ -0.44
DDX11-220ENST00000542244 ISOC2Q96AB3 205 aa12.3□□□□□ -0.44
DDX11-220ENST00000542244 ZNF561-AS1K7EIQ3 104 aa12.29□□□□□ -0.44
DDX11-220ENST00000542244 VCYO14598 125 aa12.29□□□□□ -0.44
DDX11-220ENST00000542244 PTTG1IPP53801 180 aa12.29□□□□□ -0.44
DDX11-220ENST00000542244 KRTAP10-8P60410 259 aa12.29□□□□□ -0.44
DDX11-220ENST00000542244 GAGE2BQ13066 116 aa12.29□□□□□ -0.44
DDX11-220ENST00000542244 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
DDX11-220ENST00000542244 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
DDX11-220ENST00000542244 FCER1GP30273 86 aa12.28□□□□□ -0.44
DDX11-220ENST00000542244 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
DDX11-220ENST00000542244 RPL23P62829 140 aaKnown RBP12.28□□□□□ -0.44
DDX11-220ENST00000542244 SRSF3P84103 164 aaKnown RBP12.28□□□□□ -0.44
DDX11-220ENST00000542244 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
DDX11-220ENST00000542244 A0A0J9YXV3 536 aa12.27□□□□□ -0.45
DDX11-220ENST00000542244 RIGQ13278 110 aa12.27□□□□□ -0.45
DDX11-220ENST00000542244 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
DDX11-220ENST00000542244 LINC00474Q9P2X8 69 aa12.26□□□□□ -0.45
DDX11-220ENST00000542244 A0A1B0GVG6 124 aa12.25□□□□□ -0.45
DDX11-220ENST00000542244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.25□□□□□ -0.45
DDX11-220ENST00000542244 COX7A2LO14548 114 aa12.25□□□□□ -0.45
DDX11-220ENST00000542244 RPL39P62891 51 aaKnown RBP12.25□□□□□ -0.45
DDX11-220ENST00000542244 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
DDX11-220ENST00000542244 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
DDX11-220ENST00000542244 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
DDX11-220ENST00000542244 MALP21145 153 aa12.24□□□□□ -0.45
DDX11-220ENST00000542244 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
DDX11-220ENST00000542244 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
DDX11-220ENST00000542244 LOC107984640A0A0U1RRK4 108 aa12.23□□□□□ -0.45
DDX11-220ENST00000542244 ADIRFQ15847 76 aa12.23□□□□□ -0.45
DDX11-220ENST00000542244 Q6ZRP5 223 aa12.23□□□□□ -0.45
DDX11-220ENST00000542244 CAMK2N2Q96S95 79 aa12.23□□□□□ -0.45
DDX11-220ENST00000542244 NAT8BQ9UHF3 227 aa12.23□□□□□ -0.45
DDX11-220ENST00000542244 RNF213Q63HN8 5207 aa12.23□□□□□ -0.45
DDX11-220ENST00000542244 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
DDX11-220ENST00000542244 FAM74A3Q4VXF1 159 aa12.22□□□□□ -0.45
DDX11-220ENST00000542244 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.45
DDX11-220ENST00000542244 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
DDX11-220ENST00000542244 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
DDX11-220ENST00000542244 APOMO95445 188 aa12.2□□□□□ -0.46
DDX11-220ENST00000542244 KRTAP11-1Q8IUC1 163 aa12.2□□□□□ -0.46
DDX11-220ENST00000542244 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
DDX11-220ENST00000542244 SPAG11BQ08648 103 aa12.19□□□□□ -0.46
DDX11-220ENST00000542244 C10orf25Q5T742 122 aa12.19□□□□□ -0.46
DDX11-220ENST00000542244 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
DDX11-220ENST00000542244 PSORS1C2Q9UIG4 136 aa12.19□□□□□ -0.46
DDX11-220ENST00000542244 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
DDX11-220ENST00000542244 NPYP01303 97 aa12.18□□□□□ -0.46
DDX11-220ENST00000542244 RPL18AQ02543 176 aaKnown RBP12.18□□□□□ -0.46
DDX11-220ENST00000542244 MRPL54Q6P161 138 aaKnown RBP12.18□□□□□ -0.46
DDX11-220ENST00000542244 C2orf48Q96LS8 159 aa12.18□□□□□ -0.46
DDX11-220ENST00000542244 FAM168BA1KXE4 195 aa12.17□□□□□ -0.46
DDX11-220ENST00000542244 TCAPO15273 167 aa12.17□□□□□ -0.46
DDX11-220ENST00000542244 PPP1R17O96001 155 aa12.17□□□□□ -0.46
DDX11-220ENST00000542244 CKS2P33552 79 aa12.17□□□□□ -0.46
DDX11-220ENST00000542244 REG3GQ6UW15 175 aa12.17□□□□□ -0.46
DDX11-220ENST00000542244 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
DDX11-220ENST00000542244 NAT8Q9UHE5 227 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms