RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
LMO3-226ENST00000541589 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 TRGV2A0A075B6R0 118 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 IGIPA6NJ69 53 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 K7EQD1 137 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 PLA2G1BP04054 148 aaKnown RBP5.77□□□□□ -1.49
LMO3-226ENST00000541589 MRPL52Q86TS9 123 aaKnown RBP5.77□□□□□ -1.49
LMO3-226ENST00000541589 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 BAALCQ8WXS3 180 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 RETNQ9HD89 108 aa5.77□□□□□ -1.49
LMO3-226ENST00000541589 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
LMO3-226ENST00000541589 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
LMO3-226ENST00000541589 F8VRH5 84 aa5.76□□□□□ -1.49
LMO3-226ENST00000541589 PLNP26678 52 aa5.76□□□□□ -1.49
LMO3-226ENST00000541589 HNRNPA3P51991 378 aaKnown RBP5.76□□□□□ -1.49
LMO3-226ENST00000541589 RPL39P62891 51 aaKnown RBP5.76□□□□□ -1.49
LMO3-226ENST00000541589 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
LMO3-226ENST00000541589 LINC00612Q8N6U2 182 aa5.76□□□□□ -1.49
LMO3-226ENST00000541589 RPL36ALQ969Q0 106 aaKnown RBP5.76□□□□□ -1.49
LMO3-226ENST00000541589 CHTOPQ9Y3Y2 248 aaKnown RBP5.76□□□□□ -1.49
LMO3-226ENST00000541589 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 TRBV6-4A0A1B0GX49 114 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 PRSS29PA6NIE9 313 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 COX8AP10176 69 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 COTL1Q14019 142 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 PMVKQ15126 192 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 Q9UF83 564 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 NACAE9PAV3 2078 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 DNAH2Q9P225 4427 aa5.75□□□□□ -1.49
LMO3-226ENST00000541589 DNAH11Q96DT5 4516 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 TRGV4A0A0C4DH28 118 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 LYRM9A8MSI8 78 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 NPSP0C0P6 89 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 EMP1P54849 157 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 DEFB135Q30KP9 77 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 STPG4Q8N801 248 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 SLC25A29Q8N8R3 303 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 ZNRF2Q8NHG8 242 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 HHLA3Q9XRX5 114 aa5.74□□□□□ -1.49
LMO3-226ENST00000541589 MRPS16Q9Y3D3 137 aaKnown RBP5.74□□□□□ -1.49
LMO3-226ENST00000541589 M0R143 59 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 MIFP14174 115 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 UBE2D3P61077 147 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 UBE2D2P62837 147 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 CTAG1AP78358 180 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 FHL2Q14192 279 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 LBHQ53QV2 105 aaPredicted RBP5.73□□□□□ -1.49
LMO3-226ENST00000541589 ZC2HC1BQ5TFG8 222 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 DAZ4Q86SG3 579 aaKnown RBP5.73□□□□□ -1.49
LMO3-226ENST00000541589 OR11H2Q8NH07 326 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 PHLDA1Q8WV24 401 aaPredicted RBP5.73□□□□□ -1.49
LMO3-226ENST00000541589 RNF183Q96D59 192 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 CST9LQ9H4G1 147 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 DAZ3Q9NR90 486 aaKnown RBP5.73□□□□□ -1.49
LMO3-226ENST00000541589 SPANXA1Q9NS26 97 aa5.73□□□□□ -1.49
LMO3-226ENST00000541589 IGLV4-3A0A075B6K6 122 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 IGHV3-38A0A0C4DH36 116 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 GAGE12JA6NER3 117 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 DLEU1O43261 78 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 DEFB130BP0DP73 79 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 DEFB130AP0DP74 79 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 CRYBA4P53673 196 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 GAGE1Q13065 139 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 GAGE4Q13068 117 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 GAGE5Q13069 117 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 GAGE13Q4V321 117 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 PRADC1Q9BSG0 188 aa5.72□□□□□ -1.49
LMO3-226ENST00000541589 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 FGF6P10767 208 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 NMUP48645 174 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 FAM222AQ5U5X8 452 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 BOD1L2Q8IYS8 172 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 Q8NAQ8 132 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 SNHG12Q9BXW3 62 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.49
LMO3-226ENST00000541589 DNAH17Q9UFH2 4485 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 HERC1Q15751 4861 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 IGLV4-69A0A075B6H9 119 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.71□□□□□ -1.5
LMO3-226ENST00000541589 IGKV2-29A2NJV5 120 aaPredicted RBP5.71□□□□□ -1.5
LMO3-226ENST00000541589 NUPR2A6NF83 97 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 LINC00694P0DN24 101 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 SMAGPQ0VAQ4 97 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 AMELXQ99217 191 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 OPRPNQ99935 248 aaPredicted RBP5.71□□□□□ -1.5
LMO3-226ENST00000541589 C2orf88Q9BSF0 95 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 GTSF1LQ9H1H1 148 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 VCX2Q9H322 139 aa5.71□□□□□ -1.5
LMO3-226ENST00000541589 HSPG2P98160 4391 aa5.7□□□□□ -1.5
LMO3-226ENST00000541589 IGKV2D-26A0A0A0MRZ7 120 aa5.7□□□□□ -1.5
LMO3-226ENST00000541589 C11orf86A6NJI1 115 aa5.7□□□□□ -1.5
LMO3-226ENST00000541589 SIVA1O15304 175 aa5.7□□□□□ -1.5
LMO3-226ENST00000541589 TCTAP57738 103 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms