RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 IGKV3OR2-268A0A0C4DH90 116 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 RIGQ13278 110 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 AMN1Q8IY45 258 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 NRACQ8N912 160 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 BTF3L4Q96K17 158 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 TMEM242Q9NWH2 141 aa8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
SEMA4D-223ENST00000540475 VCYO14598 125 aa8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 PPP1R17O96001 155 aa8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 RPL23P62829 140 aaKnown RBP8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 COX6A2Q02221 97 aa8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 Q6ZRU5 148 aa8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 ZNF664Q8N3J9 261 aa8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
SEMA4D-223ENST00000540475 SMIM27A0A1W2PRY6 76 aa8.27□□□□□ -1.09
SEMA4D-223ENST00000540475 C9JQL5 133 aa8.27□□□□□ -1.09
SEMA4D-223ENST00000540475 HIGD2BQ4VC39 106 aa8.27□□□□□ -1.09
SEMA4D-223ENST00000540475 CD164L2Q6UWJ8 174 aa8.27□□□□□ -1.09
SEMA4D-223ENST00000540475 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
SEMA4D-223ENST00000540475 NAT8BQ9UHF3 227 aa8.27□□□□□ -1.09
SEMA4D-223ENST00000540475 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 C7orf77A4D0Y5 90 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 CCL25O15444 150 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 FAM104BQ5XKR9 115 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 NAT8Q9UHE5 227 aa8.26□□□□□ -1.09
SEMA4D-223ENST00000540475 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 LINC00862A6NCI5 91 aa8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 XCL1P47992 114 aa8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 SS18Q15532 418 aa8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
SEMA4D-223ENST00000540475 A0A1B0GW15 77 aa8.24□□□□□ -1.09
SEMA4D-223ENST00000540475 SMKR1H3BMG3 65 aa8.24□□□□□ -1.09
SEMA4D-223ENST00000540475 PPP1R2P9O14990 202 aa8.24□□□□□ -1.09
SEMA4D-223ENST00000540475 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
SEMA4D-223ENST00000540475 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
SEMA4D-223ENST00000540475 TIMM21Q9BVV7 248 aa8.24□□□□□ -1.09
SEMA4D-223ENST00000540475 C1orf196B1AJZ1 125 aa8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 PHOX2AO14813 284 aa8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 SRSF3P84103 164 aaKnown RBP8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 SMAGPQ0VAQ4 97 aa8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 PEA15Q15121 130 aa8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 LINC00474Q9P2X8 69 aa8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
SEMA4D-223ENST00000540475 A0A096LNI7 61 aa8.22□□□□□ -1.09
SEMA4D-223ENST00000540475 ADIRFQ15847 76 aa8.22□□□□□ -1.09
SEMA4D-223ENST00000540475 MAJINQ3KP22 176 aa8.22□□□□□ -1.09
SEMA4D-223ENST00000540475 KIR2DL4Q99706 377 aa8.22□□□□□ -1.09
SEMA4D-223ENST00000540475 FCER1GP30273 86 aa8.21□□□□□ -1.1
SEMA4D-223ENST00000540475 STPG4Q8N801 248 aa8.21□□□□□ -1.1
SEMA4D-223ENST00000540475 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
SEMA4D-223ENST00000540475 FAM104AQ969W3 186 aa8.21□□□□□ -1.1
SEMA4D-223ENST00000540475 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
SEMA4D-223ENST00000540475 A0A1B0GXF2 115 aa8.2□□□□□ -1.1
SEMA4D-223ENST00000540475 TCAPO15273 167 aa8.2□□□□□ -1.1
SEMA4D-223ENST00000540475 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
SEMA4D-223ENST00000540475 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
SEMA4D-223ENST00000540475 CARD19Q96LW7 228 aa8.2□□□□□ -1.1
SEMA4D-223ENST00000540475 ZNF561-AS1K7EIQ3 104 aa8.19□□□□□ -1.1
SEMA4D-223ENST00000540475 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
SEMA4D-223ENST00000540475 CAMPP49913 170 aa8.19□□□□□ -1.1
SEMA4D-223ENST00000540475 TMEM18Q96B42 140 aa8.19□□□□□ -1.1
SEMA4D-223ENST00000540475 COX7A2LO14548 114 aa8.18□□□□□ -1.1
SEMA4D-223ENST00000540475 S100A8P05109 93 aa8.18□□□□□ -1.1
SEMA4D-223ENST00000540475 CKS2P33552 79 aa8.18□□□□□ -1.1
SEMA4D-223ENST00000540475 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
SEMA4D-223ENST00000540475 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
SEMA4D-223ENST00000540475 IGLV4-69A0A075B6H9 119 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 F8W036 122 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 PPBPP02775 128 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 PTTG1IPP53801 180 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 HBBP68871 147 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 Q6ZUT4 128 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 SMIM2Q9BVW6 85 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
SEMA4D-223ENST00000540475 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
SEMA4D-223ENST00000540475 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
SEMA4D-223ENST00000540475 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
SEMA4D-223ENST00000540475 ATP5L2Q7Z4Y8 100 aa8.16□□□□□ -1.1
SEMA4D-223ENST00000540475 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
SEMA4D-223ENST00000540475 TRAV13-1A0A0B4J241 112 aa8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 D6R8Y8 96 aa8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 MALP21145 153 aa8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 RPL39P62891 51 aaKnown RBP8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.1
SEMA4D-223ENST00000540475 F8WDY8 70 aa8.14□□□□□ -1.11
SEMA4D-223ENST00000540475 APOMO95445 188 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms