RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
CBX3P4-202ENST00000540428 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 A8MWL6 223 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 CT83Q5H943 113 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 SLC51BQ86UW2 128 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
CBX3P4-202ENST00000540428 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
CBX3P4-202ENST00000540428 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
CBX3P4-202ENST00000540428 TSHBP01222 138 aa7.44□□□□□ -1.22
CBX3P4-202ENST00000540428 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
CBX3P4-202ENST00000540428 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
CBX3P4-202ENST00000540428 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
CBX3P4-202ENST00000540428 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 CAMPP49913 170 aa7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 PTTG1IPP53801 180 aa7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 ZNF664Q8N3J9 261 aa7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 BORCS7Q96B45 105 aa7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
CBX3P4-202ENST00000540428 LOC107984640A0A0U1RRK4 108 aa7.42□□□□□ -1.22
CBX3P4-202ENST00000540428 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
CBX3P4-202ENST00000540428 ODF1Q14990 250 aa7.42□□□□□ -1.22
CBX3P4-202ENST00000540428 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
CBX3P4-202ENST00000540428 GAS8-AS1O95177 125 aa7.41□□□□□ -1.22
CBX3P4-202ENST00000540428 SMAGPQ0VAQ4 97 aa7.41□□□□□ -1.22
CBX3P4-202ENST00000540428 TCTE3Q8IZS6 198 aa7.41□□□□□ -1.22
CBX3P4-202ENST00000540428 CSDC2Q9Y534 153 aaKnown RBP7.41□□□□□ -1.22
CBX3P4-202ENST00000540428 IGLV4-69A0A075B6H9 119 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 A0A1B0GUT8 65 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 C1orf196B1AJZ1 125 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 RAB4AP20338 218 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 MALP21145 153 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 NUP35Q8NFH5 326 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 TSKUQ8WUA8 353 aa7.4□□□□□ -1.22
CBX3P4-202ENST00000540428 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
CBX3P4-202ENST00000540428 COX7A2LO14548 114 aa7.39□□□□□ -1.23
CBX3P4-202ENST00000540428 VCYO14598 125 aa7.39□□□□□ -1.23
CBX3P4-202ENST00000540428 APOMO95445 188 aa7.39□□□□□ -1.23
CBX3P4-202ENST00000540428 C2orf48Q96LS8 159 aa7.39□□□□□ -1.23
CBX3P4-202ENST00000540428 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
CBX3P4-202ENST00000540428 A0A1W2PNN7 141 aa7.38□□□□□ -1.23
CBX3P4-202ENST00000540428 PPP1R17O96001 155 aa7.38□□□□□ -1.23
CBX3P4-202ENST00000540428 BLOC1S1P78537 153 aa7.38□□□□□ -1.23
CBX3P4-202ENST00000540428 AMN1Q8IY45 258 aa7.38□□□□□ -1.23
CBX3P4-202ENST00000540428 UBE2D4Q9Y2X8 147 aa7.38□□□□□ -1.23
CBX3P4-202ENST00000540428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 FCER1GP30273 86 aa7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 C9orf116Q5BN46 136 aaPredicted RBP7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 OSTCQ9NRP0 149 aa7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
CBX3P4-202ENST00000540428 A0A1B0GVG6 124 aa7.36□□□□□ -1.23
CBX3P4-202ENST00000540428 SUMO2P61956 95 aaKnown RBP7.36□□□□□ -1.23
CBX3P4-202ENST00000540428 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
CBX3P4-202ENST00000540428 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
CBX3P4-202ENST00000540428 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 PPP1R2P9O14990 202 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 MT-ND6P03923 174 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 CEBPGP53567 150 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 RIGQ13278 110 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 NRACQ8N912 160 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 OR10D4PQ8NGN7 298 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 TMEM18Q96B42 140 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 SMIM7Q9BQ49 75 aa7.35□□□□□ -1.23
CBX3P4-202ENST00000540428 F8WDY8 70 aa7.34□□□□□ -1.23
CBX3P4-202ENST00000540428 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.23
CBX3P4-202ENST00000540428 SPAG11BQ08648 103 aa7.34□□□□□ -1.23
CBX3P4-202ENST00000540428 C1orf137Q5JT78 98 aa7.34□□□□□ -1.23
CBX3P4-202ENST00000540428 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
CBX3P4-202ENST00000540428 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
CBX3P4-202ENST00000540428 TCAPO15273 167 aa7.33□□□□□ -1.24
CBX3P4-202ENST00000540428 RNASE13Q5GAN3 156 aaKnown RBP7.33□□□□□ -1.24
CBX3P4-202ENST00000540428 ALKAL2Q6UX46 152 aa7.33□□□□□ -1.24
CBX3P4-202ENST00000540428 Q6ZUT4 128 aa7.33□□□□□ -1.24
CBX3P4-202ENST00000540428 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
CBX3P4-202ENST00000540428 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 RPL32P62910 135 aaKnown RBP7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 DIRC1Q969H9 104 aa7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 IMMP2LQ96T52 175 aa7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 V9GYV3 84 aa7.32□□□□□ -1.24
CBX3P4-202ENST00000540428 TRBV24-1A0A075B6N3 115 aa7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 LINC00862A6NCI5 91 aa7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 TLX1NBP0CAT3 122 aa7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 FAM104BQ5XKR9 115 aa7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 NAT8BQ9UHF3 227 aa7.31□□□□□ -1.24
CBX3P4-202ENST00000540428 IGHV3OR16-9A0A0B4J2B5 98 aa7.3□□□□□ -1.24
CBX3P4-202ENST00000540428 NDUFA1O15239 70 aa7.3□□□□□ -1.24
CBX3P4-202ENST00000540428 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
CBX3P4-202ENST00000540428 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
CBX3P4-202ENST00000540428 ORAOV1Q8WV07 137 aa7.3□□□□□ -1.24
CBX3P4-202ENST00000540428 H0Y9J4 135 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms